Variant report

Variant	rs6482031
Chromosome Location	chr10:37636636-37636637
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1148261	1.00[AMR][1000 genomes]
rs1148270	1.00[AMR][1000 genomes]
rs1200860	0.84[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56895000	1.00[AMR][1000 genomes]
rs58746992	1.00[AMR][1000 genomes]
rs7094926	0.80[AFR][1000 genomes]
rs73244429	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045454	chr10:37512369-37678936	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
2	esv2750892	chr10:37525594-37733381	Enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
3	nsv971877	chr10:37615294-37637158	Inactive region	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
4	esv3441992	chr10:37624992-37659509	ZNF genes & repeats	TF binding region CpG island lncRNA	2 gene(s)	inside rSNPs	diseases
5	esv3321462	chr10:37625633-37660312	ZNF genes & repeats	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases
6	esv3321473	chr10:37625633-37660312	ZNF genes & repeats	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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