Variant report

Variant	rs6484668
Chromosome Location	chr11:33802055-33802056
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:33796395..33799145-chr11:33801691..33803227,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000255272	Chromatin interaction

rs_ID	r²[population]
rs11032352	1.00[AMR][1000 genomes]
rs11032353	1.00[AMR][1000 genomes]
rs11032364	1.00[AMR][1000 genomes]
rs11032365	1.00[AMR][1000 genomes]
rs12277320	1.00[AMR][1000 genomes]
rs3181271	1.00[AMR][1000 genomes]
rs3181278	1.00[AMR][1000 genomes]
rs3181284	1.00[AMR][1000 genomes]
rs3181285	1.00[AMR][1000 genomes]
rs4237657	0.83[AFR][1000 genomes]
rs4285849	1.00[AMR][1000 genomes]
rs4366459	1.00[AMR][1000 genomes]
rs4414193	1.00[AMR][1000 genomes]
rs4623876	1.00[AMR][1000 genomes]
rs4635051	0.80[YRI][hapmap]
rs4755342	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs4756019	1.00[AMR][1000 genomes]
rs5002597	1.00[AMR][1000 genomes]
rs6484667	0.82[YRI][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7115881	1.00[AMR][1000 genomes]
rs7479064	1.00[AMR][1000 genomes]

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33799600-33802200	Enhancers	ES-I3 Cell Line	embryonic stem cell
2	chr11:33799600-33802200	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr11:33799600-33802200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
4	chr11:33799600-33802400	Enhancers	NHLF	lung
5	chr11:33799800-33802200	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr11:33799800-33802400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr11:33799800-33802400	Enhancers	HSMM	muscle
8	chr11:33799800-33802800	Enhancers	Left Ventricle	heart
9	chr11:33800000-33802400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr11:33800000-33802400	Enhancers	Muscle Satellite Cultured Cells	--
11	chr11:33800600-33802200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
12	chr11:33800600-33802400	Enhancers	Fetal Muscle Leg	muscle
13	chr11:33801000-33802200	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr11:33801200-33802400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr11:33801400-33802200	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
16	chr11:33801400-33802400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
17	chr11:33801600-33802200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
18	chr11:33801600-33802200	Enhancers	Placenta	Placenta
19	chr11:33801800-33802200	Flanking Active TSS	Fetal Heart	heart
20	chr11:33801800-33802600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr11:33801800-33802600	Weak transcription	Aorta	Aorta
22	chr11:33801800-33802800	Enhancers	HSMMtube	muscle
23	chr11:33802000-33802400	Enhancers	NH-A	brain
24	chr11:33802000-33802400	Enhancers	Osteobl	bone

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