The 2.0 version of rSNPBase

Variant report

Variant rs6506653
Chromosome Location chr18:9345255-9345256
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:9335400-9347800 Weak transcription Small Intestine intestine
2 chr18:9335400-9369400 Weak transcription Pancreas Pancrea
3 chr18:9335400-9371400 Weak transcription Gastric stomach
4 chr18:9335600-9366200 Weak transcription Left Ventricle heart
5 chr18:9335600-9372600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr18:9335800-9348000 Weak transcription Psoas Muscle Psoas
7 chr18:9335800-9348200 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr18:9335800-9348400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr18:9335800-9348400 Weak transcription Thymus Thymus
10 chr18:9335800-9357600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr18:9335800-9366200 Weak transcription Placenta Amnion Placenta Amnion
12 chr18:9335800-9367600 Weak transcription Fetal Thymus thymus
13 chr18:9335800-9367600 Weak transcription Lung lung
14 chr18:9335800-9370200 Weak transcription Adipose Nuclei Adipose
15 chr18:9336000-9346000 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr18:9336000-9348000 Weak transcription Hela-S3 cervix
17 chr18:9336000-9348400 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr18:9336000-9348400 Weak transcription Duodenum Mucosa Duodenum
19 chr18:9336000-9348600 Weak transcription H1 Cell Line embryonic stem cell
20 chr18:9336000-9355600 Weak transcription Pancreatic Islets Pancreatic Islet
21 chr18:9336000-9366200 Weak transcription Brain Angular Gyrus brain
22 chr18:9336200-9346800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr18:9336200-9347600 Weak transcription Rectal Smooth Muscle rectum
24 chr18:9336200-9348000 Weak transcription HepG2 liver
25 chr18:9336200-9348200 Weak transcription HMEC breast
26 chr18:9336200-9361400 Weak transcription Aorta Aorta
27 chr18:9336400-9349400 Weak transcription Fetal Intestine Small intestine
28 chr18:9337200-9346400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr18:9337200-9346800 Strong transcription Fetal Muscle Leg muscle
30 chr18:9337600-9347600 Strong transcription HSMM muscle
31 chr18:9337800-9345600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr18:9338000-9345400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr18:9338200-9345800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr18:9338200-9348200 Weak transcription ES-I3 Cell Line embryonic stem cell
35 chr18:9338200-9354400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr18:9338400-9346600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr18:9338400-9348200 Weak transcription K562 blood
38 chr18:9338400-9348200 Weak transcription NHEK skin
39 chr18:9338400-9348400 Weak transcription Stomach Mucosa stomach
40 chr18:9338400-9361600 Weak transcription Brain Cingulate Gyrus brain
41 chr18:9338400-9366200 Weak transcription Brain Anterior Caudate brain
42 chr18:9338800-9348000 Weak transcription Colon Smooth Muscle Colon
43 chr18:9338800-9366000 Weak transcription Brain Hippocampus Middle brain
44 chr18:9339600-9347600 Weak transcription HUVEC blood vessel
45 chr18:9339600-9365600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
46 chr18:9340600-9345600 Strong transcription Fetal Lung lung
47 chr18:9340800-9346600 Strong transcription Cortex derived primary cultured neurospheres brain
48 chr18:9341000-9371800 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr18:9341200-9348000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr18:9341200-9348000 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015