Variant report

Variant rs6515305
Chromosome Location chr20:23143635-23143636
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:23121000-23144200 Enhancers Primary monocytes fromperipheralblood blood
2 chr20:23133800-23144000 Enhancers Skeletal Muscle Female skeletal muscle
3 chr20:23137600-23144800 Weak transcription Ovary ovary
4 chr20:23138400-23146400 Enhancers Placenta Placenta
5 chr20:23138600-23144000 Enhancers Spleen Spleen
6 chr20:23139200-23143800 Enhancers Psoas Muscle Psoas
7 chr20:23139400-23143800 Enhancers Primary B cells from cord blood blood
8 chr20:23139400-23144000 Enhancers Right Atrium heart
9 chr20:23139400-23145200 Enhancers Left Ventricle heart
10 chr20:23139400-23146600 Enhancers Rectal Mucosa Donor 31 rectum
11 chr20:23139800-23143800 Enhancers Breast Myoepithelial Primary Cells Breast
12 chr20:23139800-23145200 Enhancers Lung lung
13 chr20:23139800-23146400 Enhancers Fetal Muscle Leg muscle
14 chr20:23139800-23146600 Enhancers Stomach Mucosa stomach
15 chr20:23140400-23143800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr20:23140400-23146400 Enhancers Cortex derived primary cultured neurospheres brain
17 chr20:23140400-23146600 Enhancers Rectal Mucosa Donor 29 rectum
18 chr20:23140600-23146200 Enhancers Colonic Mucosa Colon
19 chr20:23141000-23143800 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr20:23141000-23144200 Enhancers Adipose Nuclei Adipose
21 chr20:23141000-23144400 Enhancers Duodenum Mucosa Duodenum
22 chr20:23141200-23143800 Enhancers Esophagus oesophagus
23 chr20:23141200-23143800 Enhancers Right Ventricle heart
24 chr20:23141200-23144000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr20:23141200-23145400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr20:23141200-23146200 Enhancers Fetal Muscle Trunk muscle
27 chr20:23141400-23144000 Enhancers K562 blood
28 chr20:23141400-23144800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr20:23141600-23144600 Weak transcription Brain Hippocampus Middle brain
30 chr20:23141600-23144800 Weak transcription Brain Cingulate Gyrus brain
31 chr20:23141800-23143800 Weak transcription Duodenum Smooth Muscle Duodenum
32 chr20:23142200-23146000 Weak transcription H1 Cell Line embryonic stem cell
33 chr20:23142200-23146400 Enhancers Fetal Stomach stomach
34 chr20:23142600-23144000 Enhancers Sigmoid Colon Sigmoid Colon
35 chr20:23142800-23144000 Enhancers Gastric stomach
36 chr20:23142800-23144000 Enhancers Monocytes-CD14+_RO01746 blood
37 chr20:23142800-23146800 Enhancers Fetal Intestine Large intestine
38 chr20:23142800-23148000 Weak transcription NH-A brain
39 chr20:23143000-23143800 Enhancers Pancreas Pancrea
40 chr20:23143000-23144800 Enhancers Stomach Smooth Muscle stomach
41 chr20:23143000-23148000 Weak transcription NHDF-Ad bronchial
42 chr20:23143200-23144400 Enhancers Primary neutrophils fromperipheralblood blood
43 chr20:23143200-23144800 Weak transcription Fetal Lung lung
44 chr20:23143200-23147400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr20:23143400-23145000 Weak transcription Brain Germinal Matrix brain
46 chr20:23143400-23146000 Weak transcription Fetal Heart heart
47 chr20:23143400-23146200 Enhancers Skeletal Muscle Male skeletal muscle
48 chr20:23143400-23148000 Weak transcription NHEK skin
49 chr20:23143600-23143800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
50 chr20:23143600-23143800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin

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