Variant report

Variant rs653889
Chromosome Location chr11:57570430-57570431
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:57556400-57587800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr11:57559400-57571000 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr11:57564400-57575600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr11:57564600-57571000 Weak transcription Aorta Aorta
5 chr11:57567200-57573600 Weak transcription Right Atrium heart
6 chr11:57568200-57571400 Weak transcription Primary T cells fromperipheralblood blood
7 chr11:57568200-57585800 Strong transcription Fetal Muscle Trunk muscle
8 chr11:57568200-57586000 Strong transcription Fetal Muscle Leg muscle
9 chr11:57568200-57588200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr11:57568400-57586600 Strong transcription Placenta Placenta
11 chr11:57568600-57581000 Strong transcription K562 blood
12 chr11:57568600-57585800 Strong transcription Sigmoid Colon Sigmoid Colon
13 chr11:57568600-57586000 Strong transcription HUES64 Cell Line embryonic stem cell
14 chr11:57568600-57586000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr11:57568600-57586400 Strong transcription iPS-18 Cell Line embryonic stem cell
16 chr11:57568600-57586600 Strong transcription HUES48 Cell Line embryonic stem cell
17 chr11:57568600-57587000 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr11:57568600-57587200 Strong transcription HUES6 Cell Line embryonic stem cell
19 chr11:57568600-57589000 Strong transcription NHLF lung
20 chr11:57568800-57575600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr11:57568800-57575600 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr11:57568800-57585200 Strong transcription Rectal Mucosa Donor 29 rectum
23 chr11:57568800-57585600 Strong transcription Fetal Intestine Large intestine
24 chr11:57568800-57589000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr11:57568800-57589000 Strong transcription NH-A brain
26 chr11:57569000-57570600 Genic enhancers HSMMtube muscle
27 chr11:57569000-57570800 Weak transcription Primary T helper naive cells fromperipheralblood blood
28 chr11:57569000-57571000 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr11:57569000-57573200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr11:57569000-57575200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
31 chr11:57569000-57575400 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr11:57569000-57579000 Strong transcription Placenta Amnion Placenta Amnion
33 chr11:57569000-57579200 Strong transcription ES-I3 Cell Line embryonic stem cell
34 chr11:57569000-57580600 Strong transcription H9 Cell Line embryonic stem cell
35 chr11:57569000-57583800 Strong transcription NHDF-Ad bronchial
36 chr11:57569000-57584800 Strong transcription iPS-15b Cell Line embryonic stem cell
37 chr11:57569000-57584800 Strong transcription HMEC breast
38 chr11:57569000-57585000 Strong transcription HepG2 liver
39 chr11:57569000-57585800 Strong transcription H1 Cell Line embryonic stem cell
40 chr11:57569000-57586000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr11:57569000-57586400 Strong transcription Brain Germinal Matrix brain
42 chr11:57569000-57587000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr11:57569000-57587000 Strong transcription NHEK skin
44 chr11:57569000-57587200 Strong transcription Rectal Mucosa Donor 31 rectum
45 chr11:57569000-57587400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr11:57569000-57587800 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr11:57569000-57588800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr11:57569000-57589200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr11:57569200-57570600 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr11:57569200-57571000 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin

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