Variant report

Variant rs6543606
Chromosome Location chr2:31354508-31354509
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:31 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:31347800-31358800 Weak transcription Breast Myoepithelial Primary Cells Breast
2 chr2:31349600-31355000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:31349600-31355600 Weak transcription HMEC breast
4 chr2:31349800-31355400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr2:31349800-31357200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr2:31350000-31355200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr2:31350000-31359600 Weak transcription Pancreas Pancrea
8 chr2:31350200-31355800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr2:31351600-31358600 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr2:31351600-31359600 Weak transcription Primary hematopoietic stem cells short term culture blood
11 chr2:31351800-31355400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr2:31352400-31356000 Enhancers H1 Cell Line embryonic stem cell
13 chr2:31352600-31355600 Enhancers iPS-20b Cell Line embryonic stem cell
14 chr2:31353000-31356000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
15 chr2:31353200-31355200 Weak transcription H9 Cell Line embryonic stem cell
16 chr2:31353400-31358600 Enhancers Brain Germinal Matrix brain
17 chr2:31353400-31359600 Weak transcription Spleen Spleen
18 chr2:31354000-31355600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
19 chr2:31354000-31355800 Enhancers ES-I3 Cell Line embryonic stem cell
20 chr2:31354200-31355000 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr2:31354200-31355600 Enhancers iPS-18 Cell Line embryonic stem cell
22 chr2:31354200-31355800 Enhancers HUES48 Cell Line embryonic stem cell
23 chr2:31354200-31356000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
24 chr2:31354400-31354600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr2:31354400-31354600 Enhancers Fetal Brain Male brain
26 chr2:31354400-31355000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr2:31354400-31355000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr2:31354400-31355200 Enhancers HUES64 Cell Line embryonic stem cell
29 chr2:31354400-31355600 Enhancers ES-WA7 Cell Line embryonic stem cell
30 chr2:31354400-31355600 Enhancers iPS-15b Cell Line embryonic stem cell
31 chr2:31354400-31356800 Enhancers NHEK skin

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