Variant report

Variant rs6549738
Chromosome Location chr3:75476360-75476361
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:75467000-75477000 Weak transcription NH-A brain
2 chr3:75467600-75484400 Weak transcription Stomach Mucosa stomach
3 chr3:75467800-75476400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
4 chr3:75467800-75480000 Weak transcription A549 lung
5 chr3:75467800-75483600 Weak transcription Primary hematopoietic stem cells blood
6 chr3:75469400-75483000 Weak transcription NHEK skin
7 chr3:75469600-75483600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr3:75470000-75477600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr3:75470000-75478200 Weak transcription HMEC breast
10 chr3:75470000-75482200 Weak transcription Right Atrium heart
11 chr3:75470200-75478600 Weak transcription Fetal Lung lung
12 chr3:75470200-75483400 Weak transcription Rectal Smooth Muscle rectum
13 chr3:75470200-75483600 Weak transcription Brain Substantia Nigra brain
14 chr3:75470400-75476400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr3:75470400-75478600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr3:75470400-75483400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr3:75470800-75478200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr3:75470800-75482400 Weak transcription Psoas Muscle Psoas
19 chr3:75470800-75482600 Strong transcription Fetal Stomach stomach
20 chr3:75471400-75476400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr3:75471400-75477800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr3:75471400-75482200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr3:75471600-75478400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr3:75471600-75481000 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr3:75471600-75483200 Weak transcription Brain Anterior Caudate brain
26 chr3:75471800-75476400 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr3:75471800-75476400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
28 chr3:75471800-75478200 Weak transcription NHDF-Ad bronchial
29 chr3:75471800-75483200 Weak transcription iPS-18 Cell Line embryonic stem cell
30 chr3:75471800-75483200 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr3:75471800-75483600 Weak transcription Fetal Thymus thymus
32 chr3:75472000-75476400 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr3:75472000-75483200 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr3:75472000-75483600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr3:75472000-75483600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr3:75472200-75476800 Weak transcription Brain Inferior Temporal Lobe brain
37 chr3:75472400-75478200 Weak transcription HSMM muscle
38 chr3:75472400-75478200 Weak transcription HSMMtube muscle
39 chr3:75472400-75481000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr3:75473000-75483800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr3:75473200-75480400 Weak transcription Placenta Amnion Placenta Amnion
42 chr3:75473400-75476600 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr3:75473400-75477400 Strong transcription Liver Liver
44 chr3:75473600-75476400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr3:75473600-75477000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr3:75473600-75477200 Strong transcription Fetal Muscle Leg muscle
47 chr3:75473600-75478200 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr3:75473600-75483400 Weak transcription Fetal Brain Female brain
49 chr3:75473800-75477200 Weak transcription Osteobl bone
50 chr3:75474000-75477000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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