Variant report

Variant rs6554240
Chromosome Location chr4:56042593-56042594
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:44 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:56036000-56050600 Weak transcription Pancreas Pancrea
2 chr4:56036200-56044400 Weak transcription iPS-15b Cell Line embryonic stem cell
3 chr4:56036800-56044600 Weak transcription Stomach Mucosa stomach
4 chr4:56039400-56043800 Weak transcription iPS-20b Cell Line embryonic stem cell
5 chr4:56039600-56043800 Weak transcription Fetal Muscle Leg muscle
6 chr4:56041200-56042600 Enhancers NHLF lung
7 chr4:56041200-56042800 Enhancers HSMMtube muscle
8 chr4:56041400-56042800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
9 chr4:56041400-56042800 Enhancers HMEC breast
10 chr4:56041400-56044400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
11 chr4:56041600-56042600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr4:56041600-56042600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr4:56041600-56042600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
14 chr4:56041600-56042800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr4:56041600-56042800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
16 chr4:56041600-56042800 Enhancers Hela-S3 cervix
17 chr4:56041600-56043000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
18 chr4:56041600-56043000 Enhancers Fetal Adrenal Gland Adrenal Gland
19 chr4:56041600-56043000 Flanking Active TSS NH-A brain
20 chr4:56041800-56042600 Enhancers iPS-18 Cell Line embryonic stem cell
21 chr4:56041800-56042800 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
22 chr4:56041800-56042800 Enhancers HUES48 Cell Line embryonic stem cell
23 chr4:56042000-56042800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
24 chr4:56042000-56043000 Enhancers NHDF-Ad bronchial
25 chr4:56042000-56043800 Flanking Active TSS HUVEC blood vessel
26 chr4:56042200-56042600 Enhancers Placenta Placenta
27 chr4:56042200-56042600 Enhancers Right Atrium heart
28 chr4:56042200-56042800 Enhancers H1 Cell Line embryonic stem cell
29 chr4:56042200-56042800 Enhancers Left Ventricle heart
30 chr4:56042200-56042800 Enhancers Lung lung
31 chr4:56042200-56043000 Active TSS ES-WA7 Cell Line embryonic stem cell
32 chr4:56042200-56043000 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr4:56042200-56043000 Enhancers Muscle Satellite Cultured Cells --
34 chr4:56042200-56047400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr4:56042400-56042600 Enhancers Spleen Spleen
36 chr4:56042400-56042600 Enhancers Osteobl bone
37 chr4:56042400-56042800 Flanking Active TSS H9 Cell Line embryonic stem cell
38 chr4:56042400-56042800 Flanking Active TSS HUES64 Cell Line embryonic stem cell
39 chr4:56042400-56044000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr4:56042400-56047200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr4:56042400-56047400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr4:56042400-56047400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr4:56042400-56047600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr4:56042400-56049800 Weak transcription HSMM muscle

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