Variant report
Variant | rs6561450 |
---|---|
Chromosome Location | chr13:49086117-49086118 |
allele | C/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr13:49054000-49094000 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
2 | chr13:49063000-49087800 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
3 | chr13:49067200-49105200 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
4 | chr13:49067200-49105400 | Weak transcription | Rectal Smooth Muscle | rectum |
5 | chr13:49067800-49098000 | Weak transcription | Right Ventricle | heart |
6 | chr13:49068000-49105600 | Weak transcription | Gastric | stomach |
7 | chr13:49068200-49102600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
8 | chr13:49071200-49105600 | Weak transcription | Fetal Brain Male | brain |
9 | chr13:49071800-49086200 | Strong transcription | Fetal Stomach | stomach |
10 | chr13:49071800-49105800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
11 | chr13:49072000-49088400 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
12 | chr13:49072200-49095600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
13 | chr13:49073600-49087800 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
14 | chr13:49075600-49093400 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
15 | chr13:49075600-49095200 | Weak transcription | Fetal Intestine Large | intestine |
16 | chr13:49075800-49088400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
17 | chr13:49075800-49093200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
18 | chr13:49076600-49097400 | Weak transcription | Pancreas | Pancrea |
19 | chr13:49079600-49091000 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
20 | chr13:49079600-49092200 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
21 | chr13:49080600-49087800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
22 | chr13:49080600-49105600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
23 | chr13:49080800-49086200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
24 | chr13:49080800-49087400 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
25 | chr13:49080800-49102200 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
26 | chr13:49080800-49105400 | Weak transcription | Duodenum Mucosa | Duodenum |
27 | chr13:49081000-49090200 | Weak transcription | HSMM | muscle |
28 | chr13:49081400-49088600 | Weak transcription | Primary hematopoietic stem cells | blood |
29 | chr13:49081400-49105600 | Weak transcription | Placenta | Placenta |
30 | chr13:49081600-49088000 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
31 | chr13:49082000-49086800 | Weak transcription | Thymus | Thymus |
32 | chr13:49082600-49087000 | Strong transcription | Fetal Brain Female | brain |
33 | chr13:49083000-49087000 | Strong transcription | Fetal Lung | lung |
34 | chr13:49083400-49094400 | Weak transcription | Fetal Intestine Small | intestine |
35 | chr13:49083400-49095800 | Weak transcription | Spleen | Spleen |
36 | chr13:49083800-49105600 | Weak transcription | Esophagus | oesophagus |
37 | chr13:49084800-49086200 | Strong transcription | Liver | Liver |
38 | chr13:49084800-49086200 | Enhancers | Lung | lung |
39 | chr13:49084800-49086400 | Strong transcription | Brain Germinal Matrix | brain |
40 | chr13:49084800-49086400 | Active TSS | Pancreatic Islets | Pancreatic Islet |
41 | chr13:49085000-49086600 | Weak transcription | H9 Cell Line | embryonic stem cell |
42 | chr13:49085000-49087200 | Strong transcription | GM12878-XiMat | blood |
43 | chr13:49085000-49088400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
44 | chr13:49085000-49091200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
45 | chr13:49085000-49096000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
46 | chr13:49085000-49096600 | Weak transcription | Small Intestine | intestine |
47 | chr13:49085000-49104800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
48 | chr13:49085000-49104800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
49 | chr13:49085200-49086800 | Strong transcription | Primary neutrophils fromperipheralblood | blood |
50 | chr13:49085200-49096000 | Strong transcription | Primary monocytes fromperipheralblood | blood |