Variant report
Variant | rs6561574 |
---|---|
Chromosome Location | chr13:50618594-50618595 |
allele | A/C |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr13:50578600-50629800 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
2 | chr13:50578800-50654400 | Weak transcription | Esophagus | oesophagus |
3 | chr13:50586800-50654200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
4 | chr13:50587000-50633800 | Weak transcription | Hela-S3 | cervix |
5 | chr13:50587000-50645600 | Weak transcription | Spleen | Spleen |
6 | chr13:50588000-50645600 | Weak transcription | Ovary | ovary |
7 | chr13:50589800-50645600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
8 | chr13:50590000-50624200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
9 | chr13:50590200-50653600 | Weak transcription | Small Intestine | intestine |
10 | chr13:50593000-50618600 | Weak transcription | HMEC | breast |
11 | chr13:50594600-50622600 | Weak transcription | A549 | lung |
12 | chr13:50594600-50635000 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
13 | chr13:50594800-50641000 | Weak transcription | Lung | lung |
14 | chr13:50594800-50643200 | Weak transcription | Brain Hippocampus Middle | brain |
15 | chr13:50594800-50643600 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
16 | chr13:50595000-50654200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
17 | chr13:50595200-50640000 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
18 | chr13:50595800-50654400 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
19 | chr13:50596400-50620400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
20 | chr13:50597000-50624600 | Weak transcription | Fetal Lung | lung |
21 | chr13:50598200-50629800 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
22 | chr13:50598200-50634800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
23 | chr13:50598200-50641000 | Weak transcription | Brain Inferior Temporal Lobe | brain |
24 | chr13:50598600-50626000 | Weak transcription | Primary T cells fromperipheralblood | blood |
25 | chr13:50598600-50627800 | Weak transcription | Brain Germinal Matrix | brain |
26 | chr13:50598600-50640000 | Weak transcription | Placenta | Placenta |
27 | chr13:50598600-50650200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
28 | chr13:50601600-50626200 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
29 | chr13:50601600-50641000 | Weak transcription | Left Ventricle | heart |
30 | chr13:50602000-50618600 | Weak transcription | Primary T regulatory cells fromperipheralblood | blood |
31 | chr13:50604800-50634000 | Weak transcription | NHEK | skin |
32 | chr13:50605000-50624000 | Weak transcription | K562 | blood |
33 | chr13:50608600-50621000 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
34 | chr13:50608600-50639800 | Weak transcription | NHLF | lung |
35 | chr13:50610600-50621400 | Weak transcription | GM12878-XiMat | blood |
36 | chr13:50611800-50646400 | Strong transcription | Fetal Thymus | thymus |
37 | chr13:50612200-50639800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
38 | chr13:50612400-50618600 | Strong transcription | Osteobl | bone |
39 | chr13:50612400-50619800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
40 | chr13:50612400-50639800 | Strong transcription | Dnd41 | blood |
41 | chr13:50612400-50643000 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
42 | chr13:50612600-50639800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
43 | chr13:50612600-50644200 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
44 | chr13:50612800-50620400 | Weak transcription | Fetal Stomach | stomach |
45 | chr13:50612800-50622400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
46 | chr13:50612800-50645400 | Weak transcription | HSMMtube | muscle |
47 | chr13:50613400-50622600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
48 | chr13:50613800-50619400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
49 | chr13:50613800-50620400 | Weak transcription | Fetal Intestine Small | intestine |
50 | chr13:50614000-50619600 | Strong transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |