Variant report

Variant	rs6574775
Chromosome Location	chr14:84619066-84619067
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10135627	0.89[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs12100815	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12100819	0.81[ASN][1000 genomes]
rs1676055	0.81[ASN][1000 genomes]
rs2249653	0.81[ASN][1000 genomes]
rs4899846	0.89[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs4899847	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4904160	0.81[ASN][1000 genomes]
rs4904161	0.81[ASN][1000 genomes]
rs4904165	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6574774	0.81[ASN][1000 genomes]
rs7160548	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv565376	chr14:84612088-84644822	Enhancers Weak transcription	TF binding region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:84618600-84619200	Enhancers	Spleen	Spleen
2	chr14:84619000-84619800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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