Variant report

Variant	rs6583288
Chromosome Location	chr3:195809564-195809565
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MAZ	chr3:195807823-195809960	IMR90	lung:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429
2	BCLAF1	chr3:195808620-195809623	GM12878	blood:	n/a	chr3:195809098-195809111 chr3:195808762-195808775 chr3:195809001-195809014
3	IRF1	chr3:195807406-195809731	K562	blood:	n/a	chr3:195809586-195809600 chr3:195807710-195807724 chr3:195809425-195809445 chr3:195808997-195809011 chr3:195809588-195809602 chr3:195809583-195809600 chr3:195809587-195809607 chr3:195809588-195809599 chr3:195807800-195807817 chr3:195809588-195809601 chr3:195809588-195809601 chr3:195807600-195807617 chr3:195809080-195809094 chr3:195809589-195809603 chr3:195809585-195809599 chr3:195809588-195809601 chr3:195809536-195809550
4	CBX3	chr3:195808367-195809805	K562	blood:	n/a	n/a
5	MAX	chr3:195807825-195809782	Hela-S3	cervix:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
6	IRF1	chr3:195807481-195809670	K562	blood:	n/a	chr3:195809586-195809600 chr3:195807710-195807724 chr3:195809425-195809445 chr3:195808997-195809011 chr3:195809588-195809602 chr3:195809583-195809600 chr3:195809587-195809607 chr3:195809588-195809599 chr3:195807800-195807817 chr3:195809588-195809601 chr3:195809588-195809601 chr3:195807600-195807617 chr3:195809080-195809094 chr3:195809589-195809603 chr3:195809585-195809599 chr3:195809588-195809601 chr3:195809536-195809550
7	TEAD4	chr3:195807250-195809647	K562	blood:	n/a	chr3:195809363-195809372
8	MAX	chr3:195808037-195809619	HCT-116	colon:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
9	MXI1	chr3:195807868-195809784	HepG2	liver:	n/a	chr3:195808418-195808427
10	RELA	chr3:195808753-195809675	GM12892	blood:	n/a	n/a
11	MAX	chr3:195808035-195809600	A549	lung:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
12	TBP	chr3:195808750-195809759	Hela-S3	cervix:	n/a	n/a
13	SIN3AK20	chr3:195807293-195809619	MCF-7	breast:	n/a	n/a
14	NRF1	chr3:195808112-195809651	SK-N-SH	brain:	n/a	chr3:195809102-195809111 chr3:195809081-195809090 chr3:195808493-195808507 chr3:195808462-195808476 chr3:195809001-195809010
15	HCFC1	chr3:195807314-195810049	Hela-S3	cervix:	n/a	n/a
16	MAX	chr3:195807754-195809601	ECC-1	luminal epithelium:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
17	GATA3	chr3:195807333-195809873	T-47D	breast:	n/a	chr3:195809032-195809042 chr3:195809429-195809439 chr3:195807823-195807839 chr3:195807580-195807596
18	CEBPB	chr3:195809274-195809860	K562	blood:	n/a	chr3:195809620-195809629 chr3:195809619-195809630 chr3:195809620-195809629 chr3:195809618-195809631 chr3:195809620-195809629 chr3:195809618-195809629 chr3:195809620-195809629
19	RFX5	chr3:195808497-195809606	HepG2	liver:	n/a	chr3:195809234-195809248
20	REST	chr3:195807636-195809832	H1-neurons	neurons:	n/a	chr3:195808437-195808457 chr3:195808826-195808835 chr3:195809118-195809131
21	USF2	chr3:195807417-195809684	Hela-S3	cervix:	n/a	chr3:195808768-195808784 chr3:195808829-195808845 chr3:195808835-195808851 chr3:195808708-195808724 chr3:195808417-195808428 chr3:195808483-195808499 chr3:195808439-195808455 chr3:195808843-195808859 chr3:195809097-195809113
22	MYC	chr3:195807875-195809788	NB4	blood:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
23	STAT3	chr3:195809283-195809593	GM12878	blood:	n/a	n/a
24	E2F4	chr3:195808469-195809768	MCF10A-Er-Src	breast:	n/a	chr3:195808996-195809006 chr3:195808792-195808799 chr3:195808792-195808799 chr3:195809154-195809165 chr3:195809081-195809090 chr3:195809154-195809161 chr3:195809001-195809010 chr3:195808792-195808799 chr3:195809102-195809111 chr3:195808791-195808803 chr3:195809154-195809165
25	GATA3	chr3:195808677-195809758	T-47D	breast:	n/a	chr3:195809032-195809042 chr3:195809429-195809439
26	MAX	chr3:195807870-195809648	HCT-116	colon:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
27	CREB1	chr3:195808098-195809818	HepG2	liver:	n/a	n/a
28	CEBPB	chr3:195809470-195809727	H1-hESC	embryonic stem cell:	n/a	chr3:195809620-195809629 chr3:195809619-195809630 chr3:195809620-195809629 chr3:195809618-195809631 chr3:195809620-195809629 chr3:195809618-195809629 chr3:195809620-195809629
29	ZKSCAN1	chr3:195808421-195809754	Hela-S3	cervix:	n/a	n/a
30	GTF2F1	chr3:195808747-195809800	Hela-S3	cervix:	n/a	n/a
31	MAX	chr3:195807831-195809703	NB4	blood:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429
32	MTA3	chr3:195807739-195809588	GM12878	blood:	n/a	n/a
33	POLR2A	chr3:195803517-195809747	PBDE	blood:	n/a	n/a
34	POLR2A	chr3:195807323-195809861	GM12891	blood:	n/a	n/a
35	FOXA1	chr3:195808763-195809640	T-47D	breast:	n/a	n/a
36	CEBPB	chr3:195809221-195809825	K562	blood:	n/a	chr3:195809620-195809629 chr3:195809619-195809630 chr3:195809620-195809629 chr3:195809618-195809631 chr3:195809620-195809629 chr3:195809618-195809629 chr3:195809620-195809629
37	POLR2A	chr3:195807311-195809599	HL-60	blood:	n/a	n/a
38	E2F6	chr3:195808220-195809576	A549	lung:	n/a	chr3:195808431-195808441 chr3:195808996-195809006 chr3:195808792-195808799 chr3:195808792-195808799 chr3:195809154-195809165 chr3:195809081-195809090 chr3:195809154-195809161 chr3:195809001-195809010 chr3:195808792-195808799 chr3:195809102-195809111 chr3:195808791-195808803 chr3:195809154-195809165
39	CEBPB	chr3:195809122-195809811	HepG2	liver:	n/a	chr3:195809620-195809629 chr3:195809619-195809630 chr3:195809620-195809629 chr3:195809618-195809631 chr3:195809620-195809629 chr3:195809618-195809629 chr3:195809620-195809629
40	TBL1XR1	chr3:195807569-195809793	GM12878	blood:	n/a	n/a
41	CEBPB	chr3:195809230-195809804	A549	lung:	n/a	chr3:195809620-195809629 chr3:195809619-195809630 chr3:195809620-195809629 chr3:195809618-195809631 chr3:195809620-195809629 chr3:195809618-195809629 chr3:195809620-195809629
42	RCOR1	chr3:195807697-195809825	Hela-S3	cervix:	n/a	n/a
43	POLR2A	chr3:195808251-195809603	HEK293	kidney:	n/a	n/a
44	TBP	chr3:195808728-195809603	GM12878	blood:	n/a	n/a
45	ZNF143	chr3:195808040-195809740	Hela-S3	cervix:	n/a	chr3:195808463-195808473
46	MYBL2	chr3:195808685-195809595	HepG2	liver:	n/a	n/a
47	BRCA1	chr3:195807839-195809843	Hela-S3	cervix:	n/a	n/a
48	CHD2	chr3:195808283-195809620	Hela-S3	cervix:	n/a	chr3:195809131-195809141 chr3:195809154-195809161
49	EP300	chr3:195809117-195809794	Hela-S3	cervix:	n/a	chr3:195809616-195809630 chr3:195809427-195809441
50	MAX	chr3:195807757-195809640	A549	lung:	n/a	chr3:195808419-195808428 chr3:195808418-195808429 chr3:195808417-195808430 chr3:195808418-195808429 chr3:195808420-195808429 chr3:195808417-195808430 chr3:195808421-195808428 chr3:195808419-195808429 chr3:195808419-195808429

No.	Distal block	Cell Line	Cell type
1	chr3:195796379..195810322-chr3:195910077..195926320,43	MCF-7	breast:
2	chr3:195806834..195810300-chr3:195921968..195927592,7	MCF-7	breast:
3	chr3:195807059..195809798-chr3:196063350..196066594,3	K562	blood:
4	chr3:195807808..195810201-chr5:170814648..170817233,2	MCF-7	breast:
5	chr3:195791142..195792773-chr3:195808257..195810769,2	MCF-7	breast:
6	chr3:195793504..195812987-chr3:195901613..195938073,113	K562	blood:
7	chr3:195809070..195810748-chr3:195828208..195830757,2	MCF-7	breast:
8	chr3:195808373..195809995-chr3:196228997..196231632,2	K562	blood:
9	chr3:195807469..195810377-chr3:195942089..195944693,4	MCF-7	breast:
10	chr3:195781940..195789641-chr3:195805045..195810311,11	K562	blood:
11	chr3:195807091..195810537-chr3:195867675..195869638,3	MCF-7	breast:
12	chr3:195785083..195788008-chr3:195807392..195810078,3	MCF-7	breast:
13	chr3:195806658..195811369-chr3:195865432..195872361,14	MCF-7	breast:
14	chr11:73087137..73087958-chr3:195809064..195809637,2	HCT-116	colon:
15	chr3:195808495..195810108-chr3:196228997..196231874,2	K562	blood:
16	chr19:49989753..49992423-chr3:195807241..195809770,2	MCF-7	breast:
17	chr3:195635569..195638518-chr3:195807424..195810696,3	MCF-7	breast:
18	chr3:195794950..195798022-chr3:195807553..195809899,4	MCF-7	breast:
19	chr3:195804323..195810515-chr3:195865435..195874009,30	K562	blood:
20	chr3:195790520..195792759-chr3:195806929..195809899,2	MCF-7	breast:
21	chr3:195806535..195810385-chr3:195863612..195875110,36	K562	blood:
22	chr3:195793504..195812415-chr3:195915832..195927942,46	K562	blood:

Variant related genes	Relation type
TFRC	TF binding region
ENSG00000181163	Chromatin interaction
ENSG00000222335	Chromatin interaction
ENSG00000163958	Chromatin interaction
ENSG00000273331	Chromatin interaction
ENSG00000163961	Chromatin interaction
ENSG00000142541	Chromatin interaction
ENSG00000072274	Chromatin interaction
ENSG00000224652	Chromatin interaction
ENSG00000054967	Chromatin interaction
ENSG00000145107	Chromatin interaction
ENSG00000061938	Chromatin interaction
ENSG00000163959	Chromatin interaction

Extended variants
information (count: 37 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs41297529	1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs41298085	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs41298089	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs41300373	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs41300395	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs41300435	1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs454516	0.94[CEU][hapmap];0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4927866	1.00[ASW][hapmap];0.94[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.95[MKK][hapmap];1.00[TSI][hapmap];0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs526860	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs528682	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs6783079	1.00[CHD][hapmap]
rs6799597	1.00[CEU][hapmap];0.94[TSI][hapmap];1.00[YRI][hapmap]
rs73208098	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7617509	0.89[CEU][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs7619708	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:22 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2759213	chr3:195102787-196071593	Active TSS Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	144 gene(s)	inside rSNPs	diseases
2	nsv428102	chr3:195201080-195829426	Weak transcription Enhancers Bivalent/Poised TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
3	nsv428430	chr3:195201080-195829426	Strong transcription Enhancers Weak transcription Active TSS Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	88 gene(s)	inside rSNPs	diseases
4	esv2757913	chr3:195379484-196071593	Weak transcription Genic enhancers Enhancers Active TSS Strong transcription ZNF genes & repeats Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	108 gene(s)	inside rSNPs	diseases
5	nsv1010395	chr3:195641908-195848264	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
6	nsv532213	chr3:195643944-196063636	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
7	esv1820982	chr3:195651349-195835519	Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
8	nsv997797	chr3:195658360-196212958	Weak transcription Flanking Active TSS Genic enhancers Strong transcription Enhancers Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	98 gene(s)	inside rSNPs	diseases
9	nsv878170	chr3:195677895-195871388	Enhancers Strong transcription Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	56 gene(s)	inside rSNPs	diseases
10	nsv878171	chr3:195677895-195959924	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
11	nsv1008512	chr3:195709662-195974936	Strong transcription Active TSS Flanking Active TSS Enhancers Weak transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	58 gene(s)	inside rSNPs	diseases
12	nsv1002584	chr3:195734933-195910772	Active TSS Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	51 gene(s)	inside rSNPs	diseases
13	nsv432543	chr3:195746690-196015690	Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Weak transcription Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	69 gene(s)	inside rSNPs	diseases
14	nsv878172	chr3:195751853-195831098	Strong transcription Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
15	nsv532214	chr3:195762648-195916068	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
16	nsv1002065	chr3:195769609-195877692	Transcr. at gene 5' and 3' Enhancers Flanking Active TSS Active TSS Weak transcription Strong transcription Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
17	nsv1009105	chr3:195769609-195984388	Weak transcription Enhancers Flanking Active TSS Strong transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
18	nsv524410	chr3:195776240-195816195	Weak transcription Strong transcription Active TSS Genic enhancers Flanking Active TSS Enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	42 gene(s)	inside rSNPs	diseases
19	nsv461130	chr3:195776240-195907653	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
20	nsv593069	chr3:195776240-195907653	Flanking Active TSS Weak transcription Enhancers Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
21	nsv1005558	chr3:195789462-195919077	Weak transcription Enhancers Strong transcription Active TSS Genic enhancers Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases
22	nsv536890	chr3:195789462-195919077	Enhancers Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	49 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs6583288	PPP1R2	cis	parietal	SCAN

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:195806200-195809800	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr3:195806600-195809600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
3	chr3:195807000-195809600	Active TSS	Colonic Mucosa	Colon
4	chr3:195807400-195809800	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
5	chr3:195807400-195809800	Active TSS	Pancreatic Islets	Pancreatic Islet
6	chr3:195807600-195809600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
7	chr3:195807800-195809600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
8	chr3:195807800-195809600	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr3:195807800-195809600	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr3:195807800-195809600	Active TSS	Brain Angular Gyrus	brain
11	chr3:195807800-195809600	Active TSS	Rectal Mucosa Donor 29	rectum
12	chr3:195807800-195809600	Active TSS	Thymus	Thymus
13	chr3:195808000-195809600	Active TSS	Primary T helper memory cells from peripheral blood 1	blood
14	chr3:195808000-195809600	Active TSS	Fetal Brain Male	brain
15	chr3:195808000-195809600	Active TSS	Pancreas	Pancrea
16	chr3:195808000-195809600	Active TSS	Stomach Mucosa	stomach
17	chr3:195808000-195809800	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
18	chr3:195808000-195809800	Active TSS	Brain Cingulate Gyrus	brain
19	chr3:195808200-195809600	Active TSS	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr3:195808200-195809600	Active TSS	Brain Inferior Temporal Lobe	brain
21	chr3:195808200-195809600	Active TSS	Fetal Muscle Trunk	muscle
22	chr3:195808800-195809800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr3:195809000-195809600	Flanking Active TSS	Primary hematopoietic stem cells	blood
24	chr3:195809000-195809600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
25	chr3:195809000-195810000	Flanking Active TSS	Adipose Nuclei	Adipose
26	chr3:195809200-195809600	Flanking Active TSS	H1 Cell Line	embryonic stem cell
27	chr3:195809200-195809600	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
28	chr3:195809200-195809600	Flanking Active TSS	HUES64 Cell Line	embryonic stem cell
29	chr3:195809200-195809600	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr3:195809200-195809600	Flanking Active TSS	iPS-18 Cell Line	embryonic stem cell
31	chr3:195809200-195809600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
32	chr3:195809200-195809600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
33	chr3:195809200-195809600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
34	chr3:195809200-195809600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
35	chr3:195809200-195809600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
36	chr3:195809200-195809600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
37	chr3:195809200-195809600	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
38	chr3:195809200-195809600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
39	chr3:195809200-195809600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
40	chr3:195809200-195809600	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr3:195809200-195809600	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
42	chr3:195809200-195809600	Flanking Active TSS	Colon Smooth Muscle	Colon
43	chr3:195809200-195809600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
44	chr3:195809200-195809600	Flanking Active TSS	Fetal Heart	heart
45	chr3:195809200-195809600	Flanking Active TSS	Fetal Muscle Leg	muscle
46	chr3:195809200-195809600	Flanking Active TSS	Rectal Smooth Muscle	rectum
47	chr3:195809200-195809600	Active TSS	Right Atrium	heart
48	chr3:195809200-195809600	Flanking Active TSS	HepG2	liver
49	chr3:195809200-195809600	Flanking Active TSS	HSMMtube	muscle
50	chr3:195809200-195809600	Flanking Active TSS	NH-A	brain

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