The 2.0 version of rSNPBase

Variant report

Variant rs6588095
Chromosome Location chr1:47724166-47724167
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47705200-47766400 Weak transcription Placenta Amnion Placenta Amnion
2 chr1:47705600-47766400 Weak transcription Primary T cells from cord blood blood
3 chr1:47709800-47725400 Weak transcription H9 Cell Line embryonic stem cell
4 chr1:47709800-47726000 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr1:47709800-47745000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr1:47711000-47727800 Weak transcription A549 lung
7 chr1:47712600-47724200 Weak transcription Fetal Intestine Large intestine
8 chr1:47712600-47735000 Weak transcription NHDF-Ad bronchial
9 chr1:47712600-47742600 Weak transcription Fetal Lung lung
10 chr1:47712800-47729600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:47712800-47745600 Weak transcription Fetal Brain Female brain
12 chr1:47713000-47736400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:47713200-47745800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:47713600-47725400 Weak transcription Osteobl bone
15 chr1:47713800-47725400 Weak transcription Muscle Satellite Cultured Cells --
16 chr1:47713800-47745800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr1:47714000-47724200 Weak transcription Fetal Stomach stomach
18 chr1:47714200-47724200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
19 chr1:47714200-47726600 Weak transcription NHLF lung
20 chr1:47714400-47725400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr1:47714400-47726200 Weak transcription Fetal Intestine Small intestine
22 chr1:47714400-47779200 Weak transcription Small Intestine intestine
23 chr1:47714600-47745800 Weak transcription Primary B cells from cord blood blood
24 chr1:47714600-47778400 Weak transcription Fetal Heart heart
25 chr1:47714800-47732000 Weak transcription Duodenum Mucosa Duodenum
26 chr1:47714800-47741200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr1:47714800-47742800 Weak transcription Fetal Kidney kidney
28 chr1:47714800-47746000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
29 chr1:47715400-47730000 Strong transcription HUES6 Cell Line embryonic stem cell
30 chr1:47715400-47740000 Strong transcription HUES64 Cell Line embryonic stem cell
31 chr1:47715600-47749200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:47715800-47735400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:47716600-47724400 Strong transcription K562 blood
34 chr1:47716600-47739200 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr1:47716600-47772600 Strong transcription Dnd41 blood
36 chr1:47716800-47739000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr1:47717000-47725600 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr1:47717000-47745800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
39 chr1:47717600-47725200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr1:47717600-47725600 Weak transcription NH-A brain
41 chr1:47717600-47727800 Weak transcription NHEK skin
42 chr1:47717800-47725600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:47718200-47725400 Weak transcription Thymus Thymus
44 chr1:47718200-47746000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr1:47718800-47730600 Strong transcription HUES48 Cell Line embryonic stem cell
46 chr1:47718800-47739800 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr1:47719000-47725400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr1:47719800-47745800 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr1:47720200-47724200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
50 chr1:47720200-47730400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived

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Last update: Aug 31, 2015