Variant report

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	11:64216678-64218674..11:64426650-64437729	K562	blood:
2	chr11:64217228..64219708-chr11:64232084..64233983,2	K562	blood:
3	11:64216678-64218674..11:64402707-64415880	Hela-S3	cervix:
4	11:64216678-64218674..11:64415880-64426617	K562	blood:
5	11:64216678-64218674..11:64523887-64530985	Hela-S3	cervix:
6	11:64216678-64218674..11:64501239-64517861	K562	blood:
7	11:64216678-64218674..11:64356433-64395036	K562	blood:
8	chr11:64124989..64126699-chr11:64216058..64218143,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AP003774.4.1-3	chr11:64217369-64219128	NR_073177

No data

rSNPs within LD-proxies of this variant (count:3)

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832187	chr11:64121969-64312300	Genic enhancers Weak transcription Enhancers Flanking Active TSS Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	50 gene(s)	inside rSNPs	diseases
2	nsv555194	chr11:64189110-64238023	Active TSS Bivalent Enhancer Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases

mRNA abundance (count:5)

SNP	Gene	Cis/trans	Tissue	Source
rs6591849	RNASEH2C	cis	parietal	SCAN
rs6591849	FKBP2	cis	cerebellum	SCAN
rs6591849	TRPT1	cis	cerebellum	SCAN
rs6591849	TUT1	cis	parietal	SCAN
rs6591849	CCDC88B	cis	cerebellum	SCAN

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:64215000-64218200	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
2	chr11:64217200-64219000	Enhancers	Primary B cells from peripheral blood	blood
3	chr11:64217600-64218600	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr11:64217600-64220200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr11:64218000-64218200	Enhancers	Pancreas	Pancrea
6	chr11:64218000-64218600	Weak transcription	Spleen	Spleen

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