Variant report

Variant	rs6592633
Chromosome Location	chr11:76120570-76120571
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs11236742	0.86[CEU][hapmap];0.81[TSI][hapmap];0.84[EUR][1000 genomes]
rs4944107	0.81[EUR][1000 genomes]
rs4944108	1.00[CEU][hapmap];0.82[JPT][hapmap];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4945080	0.81[EUR][1000 genomes]
rs4945083	1.00[CEU][hapmap];0.93[GIH][hapmap];0.82[JPT][hapmap];1.00[MEX][hapmap];0.97[TSI][hapmap];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs4945084	0.99[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs7115322	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7129437	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7928709	0.83[CEU][hapmap]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs6592633	UCP2	cis	parietal	SCAN
rs6592633	ARRB1	cis	cerebellum	SCAN

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76097200-76122000	Weak transcription	Fetal Stomach	stomach
2	chr11:76119200-76120800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr11:76120200-76121600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr11:76120400-76121800	Weak transcription	Fetal Kidney	kidney

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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