Variant report

Variant rs6596841
Chromosome Location chr6:224445-224446
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:215000-225600 Weak transcription Right Atrium heart
2 chr6:216200-224800 Weak transcription Primary T killer memory cells from peripheral blood blood
3 chr6:220000-224600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr6:220000-224800 Weak transcription Spleen Spleen
5 chr6:220000-225400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr6:220000-225800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
7 chr6:220000-226400 Enhancers Primary hematopoietic stem cells short term culture blood
8 chr6:220200-225000 Weak transcription Fetal Thymus thymus
9 chr6:220400-225000 Weak transcription Primary neutrophils fromperipheralblood blood
10 chr6:220800-225200 Weak transcription Primary B cells from cord blood blood
11 chr6:220800-225200 Weak transcription Primary hematopoietic stem cells blood
12 chr6:221400-225400 Enhancers NHEK skin
13 chr6:221800-225000 Weak transcription Primary B cells from peripheral blood blood
14 chr6:221800-225000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr6:221800-225000 Weak transcription Duodenum Mucosa Duodenum
16 chr6:222200-224600 Weak transcription Primary monocytes fromperipheralblood blood
17 chr6:222200-224800 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr6:222400-224600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr6:222400-224600 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr6:222400-224600 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr6:222400-224800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr6:222400-227200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:222600-224600 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr6:222600-227200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
25 chr6:222800-224600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr6:223200-225600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
27 chr6:223200-226200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr6:223600-224600 Enhancers Muscle Satellite Cultured Cells --
29 chr6:223600-224800 Enhancers Primary T helper cells PMA-I stimulated --
30 chr6:223600-225600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
31 chr6:223600-226200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr6:223600-226400 Weak transcription HepG2 liver
33 chr6:223600-236200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr6:223800-225800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr6:223800-225800 Enhancers HMEC breast
36 chr6:223800-226200 Enhancers Esophagus oesophagus
37 chr6:223800-232800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
38 chr6:224000-224800 Enhancers GM12878-XiMat blood
39 chr6:224000-225200 Weak transcription H1 Cell Line embryonic stem cell
40 chr6:224000-234800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr6:224200-225200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr6:224400-224600 Enhancers Right Ventricle heart
43 chr6:224400-225200 Enhancers Primary T cells fromperipheralblood blood
44 chr6:224400-226200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
45 chr6:224400-226200 Enhancers Placenta Placenta
46 chr6:224400-226800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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