Variant report

Variant rs727056
Chromosome Location chr6:225044-225045
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:215000-225600 Weak transcription Right Atrium heart
2 chr6:220000-225400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr6:220000-225800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr6:220000-226400 Enhancers Primary hematopoietic stem cells short term culture blood
5 chr6:220800-225200 Weak transcription Primary B cells from cord blood blood
6 chr6:220800-225200 Weak transcription Primary hematopoietic stem cells blood
7 chr6:221400-225400 Enhancers NHEK skin
8 chr6:222400-227200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr6:222600-227200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
10 chr6:223200-225600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
11 chr6:223200-226200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr6:223600-225600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr6:223600-226200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr6:223600-226400 Weak transcription HepG2 liver
15 chr6:223600-236200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr6:223800-225800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr6:223800-225800 Enhancers HMEC breast
18 chr6:223800-226200 Enhancers Esophagus oesophagus
19 chr6:223800-232800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr6:224000-225200 Weak transcription H1 Cell Line embryonic stem cell
21 chr6:224000-234800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr6:224200-225200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
23 chr6:224400-225200 Enhancers Primary T cells fromperipheralblood blood
24 chr6:224400-226200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
25 chr6:224400-226200 Enhancers Placenta Placenta
26 chr6:224400-226800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr6:224600-225200 Enhancers Primary monocytes fromperipheralblood blood
28 chr6:224600-225400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
29 chr6:224600-225400 Enhancers Primary T helper cells fromperipheralblood blood
30 chr6:224600-225600 Weak transcription Right Ventricle heart
31 chr6:224600-226400 Enhancers Primary Natural Killer cells fromperipheralblood blood
32 chr6:224600-226600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr6:224800-225200 Enhancers Primary T helper naive cells from peripheral blood blood
34 chr6:224800-225200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr6:224800-226000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
36 chr6:224800-226000 Enhancers Primary T killer naive cells fromperipheralblood blood
37 chr6:224800-226000 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr6:224800-226000 Enhancers Spleen Spleen
39 chr6:224800-226000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
40 chr6:224800-226200 Enhancers Primary T cells from cord blood blood
41 chr6:225000-225200 Enhancers Primary neutrophils fromperipheralblood blood
42 chr6:225000-225200 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr6:225000-225200 Enhancers Rectal Mucosa Donor 29 rectum
44 chr6:225000-225200 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
45 chr6:225000-225400 Enhancers Primary mononuclear cells fromperipheralblood Blood
46 chr6:225000-225400 Enhancers GM12878-XiMat blood
47 chr6:225000-225600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr6:225000-225800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
49 chr6:225000-225800 Enhancers Duodenum Mucosa Duodenum
50 chr6:225000-226000 Enhancers Adipose Nuclei Adipose

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