The 2.0 version of rSNPBase

Variant report

Variant rs6659045
Chromosome Location chr1:78328075-78328076
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78282800-78353400 Weak transcription HUES48 Cell Line embryonic stem cell
2 chr1:78284600-78333000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:78285600-78332000 Weak transcription Spleen Spleen
4 chr1:78286400-78333200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr1:78286600-78328400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:78290200-78334200 Weak transcription Gastric stomach
7 chr1:78296800-78329000 Weak transcription Primary T killer memory cells from peripheral blood blood
8 chr1:78298400-78340400 Weak transcription Colonic Mucosa Colon
9 chr1:78298600-78352400 Weak transcription Right Ventricle heart
10 chr1:78298800-78332800 Weak transcription Fetal Kidney kidney
11 chr1:78299400-78340200 Weak transcription NHEK skin
12 chr1:78299400-78341200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:78299600-78340200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr1:78299600-78343000 Weak transcription K562 blood
15 chr1:78299600-78353800 Weak transcription Brain Substantia Nigra brain
16 chr1:78300200-78331600 Weak transcription Lung lung
17 chr1:78300200-78332600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr1:78300800-78328800 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr1:78300800-78342200 Weak transcription Fetal Brain Male brain
20 chr1:78301400-78332800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr1:78301400-78353200 Weak transcription HSMMtube muscle
22 chr1:78301800-78342400 Weak transcription NHLF lung
23 chr1:78302000-78332000 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr1:78302800-78334200 Weak transcription HepG2 liver
25 chr1:78303800-78332800 Weak transcription Brain Cingulate Gyrus brain
26 chr1:78305800-78332200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
27 chr1:78305800-78342600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:78306000-78342600 Weak transcription Brain Angular Gyrus brain
29 chr1:78309200-78328800 Weak transcription NH-A brain
30 chr1:78309200-78352400 Weak transcription Aorta Aorta
31 chr1:78309600-78330200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:78310400-78332000 Weak transcription Fetal Thymus thymus
33 chr1:78310600-78331600 Weak transcription Left Ventricle heart
34 chr1:78310800-78333000 Weak transcription Duodenum Mucosa Duodenum
35 chr1:78311000-78332600 Weak transcription Primary neutrophils fromperipheralblood blood
36 chr1:78312000-78332800 Weak transcription Rectal Smooth Muscle rectum
37 chr1:78312000-78353000 Weak transcription Colon Smooth Muscle Colon
38 chr1:78313000-78328800 Weak transcription GM12878-XiMat blood
39 chr1:78313000-78331800 Weak transcription Osteobl bone
40 chr1:78313000-78353200 Weak transcription HUVEC blood vessel
41 chr1:78313400-78329000 Weak transcription Primary T helper cells PMA-I stimulated --
42 chr1:78313400-78329000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr1:78313400-78343200 Weak transcription Pancreas Pancrea
44 chr1:78313800-78330400 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr1:78313800-78332000 Weak transcription Thymus Thymus
46 chr1:78314000-78328200 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr1:78316200-78332200 Weak transcription Stomach Smooth Muscle stomach
48 chr1:78320000-78332600 Weak transcription Brain Anterior Caudate brain
49 chr1:78321000-78328600 Weak transcription Brain Hippocampus Middle brain
50 chr1:78321000-78332200 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015