The 2.0 version of rSNPBase

Variant report

Variant rs7544892
Chromosome Location chr1:78312358-78312359
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:104 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78252200-78315800 Weak transcription Esophagus oesophagus
2 chr1:78275000-78312800 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:78280600-78325600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr1:78281200-78316400 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:78282800-78353400 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr1:78284600-78333000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:78285600-78332000 Weak transcription Spleen Spleen
8 chr1:78286400-78333200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr1:78286600-78312800 Weak transcription Thymus Thymus
10 chr1:78286600-78328400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
11 chr1:78290200-78334200 Weak transcription Gastric stomach
12 chr1:78295200-78318400 Weak transcription Ovary ovary
13 chr1:78296800-78329000 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr1:78298400-78340400 Weak transcription Colonic Mucosa Colon
15 chr1:78298600-78327000 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr1:78298600-78352400 Weak transcription Right Ventricle heart
17 chr1:78298800-78332800 Weak transcription Fetal Kidney kidney
18 chr1:78299000-78315400 Weak transcription Fetal Brain Female brain
19 chr1:78299200-78314800 Weak transcription Cortex derived primary cultured neurospheres brain
20 chr1:78299400-78340200 Weak transcription NHEK skin
21 chr1:78299400-78341200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:78299600-78340200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:78299600-78343000 Weak transcription K562 blood
24 chr1:78299600-78353800 Weak transcription Brain Substantia Nigra brain
25 chr1:78300000-78312800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
26 chr1:78300200-78313200 Weak transcription Pancreas Pancrea
27 chr1:78300200-78331600 Weak transcription Lung lung
28 chr1:78300200-78332600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:78300800-78313400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:78300800-78320600 Weak transcription Brain Inferior Temporal Lobe brain
31 chr1:78300800-78328800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:78300800-78342200 Weak transcription Fetal Brain Male brain
33 chr1:78301000-78312600 Weak transcription HUVEC blood vessel
34 chr1:78301000-78312800 Weak transcription Primary T helper naive cells fromperipheralblood blood
35 chr1:78301400-78312800 Weak transcription Adipose Nuclei Adipose
36 chr1:78301400-78325600 Weak transcription Muscle Satellite Cultured Cells --
37 chr1:78301400-78332800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
38 chr1:78301400-78353200 Weak transcription HSMMtube muscle
39 chr1:78301800-78342400 Weak transcription NHLF lung
40 chr1:78302000-78332000 Weak transcription Skeletal Muscle Female skeletal muscle
41 chr1:78302200-78315800 Weak transcription Stomach Smooth Muscle stomach
42 chr1:78302400-78312600 Weak transcription Primary T cells from cord blood blood
43 chr1:78302800-78334200 Weak transcription HepG2 liver
44 chr1:78303600-78315800 Weak transcription Primary hematopoietic stem cells blood
45 chr1:78303800-78326000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:78303800-78332800 Weak transcription Brain Cingulate Gyrus brain
47 chr1:78304000-78312800 Weak transcription Breast Myoepithelial Primary Cells Breast
48 chr1:78304000-78320600 Weak transcription Brain Hippocampus Middle brain
49 chr1:78305800-78316600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr1:78305800-78319000 Weak transcription Fetal Muscle Leg muscle

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Last update: Aug 31, 2015