The 2.0 version of rSNPBase

Variant report

Variant rs6661179
Chromosome Location chr1:63252464-63252465
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:63249000-63252600 Active TSS Brain Inferior Temporal Lobe brain
2 chr1:63250400-63254000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:63250600-63252600 Weak transcription Pancreas Pancrea
4 chr1:63250600-63262400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr1:63250600-63266600 Weak transcription Gastric stomach
6 chr1:63250800-63252600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
7 chr1:63250800-63252600 Enhancers Primary T killer naive cells fromperipheralblood blood
8 chr1:63250800-63253200 Active TSS Brain Angular Gyrus brain
9 chr1:63250800-63319000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chr1:63251000-63252800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr1:63251000-63259600 Weak transcription Stomach Mucosa stomach
12 chr1:63251000-63266600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:63251000-63269600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr1:63251000-63272600 Weak transcription Fetal Muscle Leg muscle
15 chr1:63251000-63274800 Weak transcription Fetal Intestine Small intestine
16 chr1:63251000-63296000 Weak transcription Fetal Thymus thymus
17 chr1:63251000-63317800 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:63251000-63327400 Weak transcription Fetal Stomach stomach
19 chr1:63251200-63252800 Enhancers HepG2 liver
20 chr1:63251200-63260200 Weak transcription Primary hematopoietic stem cells blood
21 chr1:63251200-63327400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:63251400-63252800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:63251400-63252800 Enhancers Dnd41 blood
24 chr1:63251400-63257200 Weak transcription Monocytes-CD14+_RO01746 blood
25 chr1:63251400-63259000 Weak transcription Primary B cells from peripheral blood blood
26 chr1:63251400-63261200 Weak transcription Primary monocytes fromperipheralblood blood
27 chr1:63251400-63264800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr1:63251400-63275600 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr1:63251800-63260800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr1:63251800-63273000 Weak transcription iPS-18 Cell Line embryonic stem cell
31 chr1:63252000-63252800 Enhancers K562 blood
32 chr1:63252000-63266600 Weak transcription Colon Smooth Muscle Colon
33 chr1:63252000-63269600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr1:63252000-63284400 Weak transcription Primary T helper cells fromperipheralblood blood
35 chr1:63252200-63252600 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr1:63252200-63252800 Flanking Active TSS Brain Substantia Nigra brain
37 chr1:63252200-63258400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr1:63252400-63252600 Active TSS Brain Cingulate Gyrus brain
39 chr1:63252400-63252600 Enhancers Skeletal Muscle Female skeletal muscle
40 chr1:63252400-63252800 Enhancers Primary T cells from cord blood blood
41 chr1:63252400-63252800 Flanking Active TSS Brain Anterior Caudate brain
42 chr1:63252400-63252800 Enhancers Thymus Thymus
43 chr1:63252400-63252800 Flanking Active TSS GM12878-XiMat blood
44 chr1:63252400-63253000 Flanking Active TSS Brain Hippocampus Middle brain
45 chr1:63252400-63254200 Enhancers Primary B cells from cord blood blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015