The 2.0 version of rSNPBase

Variant report

Variant rs6662765
Chromosome Location chr1:94891965-94891966
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:94885200-94907200 Weak transcription Primary T cells fromperipheralblood blood
2 chr1:94885200-94915000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:94885800-94894000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:94885800-94894000 Weak transcription Colonic Mucosa Colon
5 chr1:94887400-94894800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
6 chr1:94888000-94892600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
7 chr1:94888000-94894200 Weak transcription Right Ventricle heart
8 chr1:94888000-94895000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr1:94888000-94895400 Weak transcription Lung lung
10 chr1:94888000-94902200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr1:94888200-94894000 Weak transcription Gastric stomach
12 chr1:94888200-94905400 Weak transcription Right Atrium heart
13 chr1:94888400-94914600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
14 chr1:94888600-94893200 Weak transcription Placenta Amnion Placenta Amnion
15 chr1:94889000-94899200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:94889200-94914200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
17 chr1:94889400-94894800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr1:94889600-94894000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:94889600-94896000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:94889800-94893000 Enhancers Breast Myoepithelial Primary Cells Breast
21 chr1:94889800-94895200 Weak transcription Psoas Muscle Psoas
22 chr1:94890200-94894800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:94890400-94892000 Enhancers Primary T cells from cord blood blood
24 chr1:94890400-94892000 Weak transcription Pancreas Pancrea
25 chr1:94890400-94892200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:94890400-94892200 Weak transcription Left Ventricle heart
27 chr1:94890800-94893000 Enhancers Fetal Adrenal Gland Adrenal Gland
28 chr1:94891000-94892000 Enhancers Colon Smooth Muscle Colon
29 chr1:94891000-94892000 Enhancers Fetal Intestine Small intestine
30 chr1:94891000-94892000 Enhancers HMEC breast
31 chr1:94891000-94892200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
32 chr1:94891000-94892200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:94891000-94892200 Enhancers Muscle Satellite Cultured Cells --
34 chr1:94891000-94895600 Enhancers Stomach Mucosa stomach
35 chr1:94891200-94892000 Enhancers Adipose Nuclei Adipose
36 chr1:94891200-94892000 Enhancers Fetal Intestine Large intestine
37 chr1:94891200-94892200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:94891200-94893400 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr1:94891400-94892000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:94891400-94892000 Enhancers Primary monocytes fromperipheralblood blood
41 chr1:94891400-94892000 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr1:94891400-94892000 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:94891400-94892000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:94891400-94892000 Enhancers Brain Hippocampus Middle brain
45 chr1:94891400-94892000 Enhancers Brain Substantia Nigra brain
46 chr1:94891400-94892000 Flanking Active TSS Duodenum Mucosa Duodenum
47 chr1:94891400-94892000 Enhancers Fetal Kidney kidney
48 chr1:94891400-94892000 Active TSS Pancreatic Islets Pancreatic Islet
49 chr1:94891400-94892000 Enhancers Fetal Lung lung
50 chr1:94891400-94892000 Enhancers Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015