The 2.0 version of rSNPBase

Variant report

Variant rs6667593
Chromosome Location chr1:45131401-45131402
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45104000-45138200 Weak transcription Fetal Brain Male brain
2 chr1:45115200-45137800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr1:45115800-45138000 Weak transcription NHDF-Ad bronchial
4 chr1:45117200-45137800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
5 chr1:45117200-45138600 Weak transcription Aorta Aorta
6 chr1:45117400-45138000 Weak transcription Left Ventricle heart
7 chr1:45118600-45138600 Weak transcription Colon Smooth Muscle Colon
8 chr1:45119200-45139200 Weak transcription H1 Cell Line embryonic stem cell
9 chr1:45119800-45138000 Weak transcription Primary T cells from cord blood blood
10 chr1:45120800-45134200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:45121000-45137600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr1:45121000-45138600 Weak transcription Gastric stomach
13 chr1:45123400-45132200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
14 chr1:45125400-45132000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:45125400-45137800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
16 chr1:45125400-45138000 Weak transcription Fetal Brain Female brain
17 chr1:45126200-45136800 Weak transcription Breast Myoepithelial Primary Cells Breast
18 chr1:45126200-45137600 Weak transcription Adipose Nuclei Adipose
19 chr1:45126200-45137800 Weak transcription Stomach Smooth Muscle stomach
20 chr1:45126400-45133400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr1:45126400-45137600 Weak transcription Fetal Stomach stomach
22 chr1:45126400-45137800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr1:45126400-45138200 Weak transcription Fetal Lung lung
24 chr1:45127800-45138400 Weak transcription Small Intestine intestine
25 chr1:45128000-45136400 Weak transcription Brain Hippocampus Middle brain
26 chr1:45128200-45136000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:45128200-45137000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:45128200-45137600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:45128400-45136800 Weak transcription Placenta Placenta
30 chr1:45128400-45137600 Weak transcription Right Atrium heart
31 chr1:45128400-45137800 Weak transcription iPS-20b Cell Line embryonic stem cell
32 chr1:45128600-45134200 Weak transcription Fetal Intestine Small intestine
33 chr1:45128600-45135800 Weak transcription Primary hematopoietic stem cells blood
34 chr1:45128600-45136800 Weak transcription Brain Anterior Caudate brain
35 chr1:45128600-45137000 Weak transcription Brain Inferior Temporal Lobe brain
36 chr1:45128600-45137800 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr1:45128600-45138000 Weak transcription Ovary ovary
38 chr1:45128800-45137600 Weak transcription Liver Liver
39 chr1:45128800-45137600 Weak transcription Duodenum Mucosa Duodenum
40 chr1:45128800-45138000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr1:45129000-45135000 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr1:45129000-45136000 Weak transcription Fetal Muscle Leg muscle
43 chr1:45129400-45138200 Weak transcription Fetal Intestine Large intestine
44 chr1:45129600-45138000 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr1:45129600-45138000 Weak transcription HepG2 liver
46 chr1:45130600-45137600 Weak transcription Fetal Muscle Trunk muscle
47 chr1:45130800-45132000 Weak transcription Spleen Spleen
48 chr1:45130800-45136600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr1:45130800-45137000 Weak transcription Lung lung
50 chr1:45130800-45138000 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015