The 2.0 version of rSNPBase

Variant report

Variant rs6669915
Chromosome Location chr1:84832120-84832121
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84828400-84836400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr1:84829200-84832400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr1:84829800-84836800 Weak transcription Brain Angular Gyrus brain
4 chr1:84829800-84840400 Weak transcription Brain Inferior Temporal Lobe brain
5 chr1:84830200-84833200 Enhancers HUVEC blood vessel
6 chr1:84830800-84832200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:84830800-84832600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr1:84830800-84832600 Enhancers HMEC breast
9 chr1:84830800-84832600 Enhancers NH-A brain
10 chr1:84830800-84832800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr1:84830800-84832800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:84830800-84833000 Enhancers HSMM muscle
13 chr1:84830800-84833200 Enhancers Osteobl bone
14 chr1:84830800-84833400 Enhancers NHDF-Ad bronchial
15 chr1:84830800-84833400 Enhancers NHLF lung
16 chr1:84830800-84833600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr1:84830800-84833600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr1:84831000-84832200 Enhancers K562 blood
19 chr1:84831000-84832400 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
20 chr1:84831000-84832400 Enhancers Fetal Intestine Small intestine
21 chr1:84831000-84832400 Enhancers Stomach Mucosa stomach
22 chr1:84831000-84833000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr1:84831000-84833200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr1:84831000-84833200 Enhancers Fetal Adrenal Gland Adrenal Gland
25 chr1:84831000-84838000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:84831200-84833200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:84831200-84836400 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:84831400-84832600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr1:84831600-84832200 Enhancers Placenta Placenta
30 chr1:84831600-84832400 Enhancers Adipose Nuclei Adipose
31 chr1:84831600-84832600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:84831600-84832600 Enhancers Rectal Mucosa Donor 31 rectum
33 chr1:84831600-84833600 Enhancers Esophagus oesophagus
34 chr1:84831800-84832400 Enhancers Spleen Spleen
35 chr1:84831800-84832400 Enhancers A549 lung
36 chr1:84831800-84835400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
37 chr1:84831800-84835600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr1:84832000-84832400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr1:84832000-84832400 Active TSS HSMMtube muscle
40 chr1:84832000-84832600 Enhancers Hela-S3 cervix
41 chr1:84832000-84833200 Enhancers Muscle Satellite Cultured Cells --
42 chr1:84832000-84838600 Weak transcription Psoas Muscle Psoas

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Last update: Aug 31, 2015