Variant report

Variant	rs6673971
Chromosome Location	chr1:94726113-94726114
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs7537553	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv428510	chr1:94709575-94866655	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:94721600-94726400	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr1:94723000-94726800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
3	chr1:94723400-94726200	Enhancers	Osteobl	bone
4	chr1:94723400-94726800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr1:94723600-94726800	Enhancers	HSMM	muscle
6	chr1:94723600-94726800	Enhancers	NHDF-Ad	bronchial
7	chr1:94723800-94726600	Enhancers	HSMMtube	muscle
8	chr1:94724000-94726200	Enhancers	NHLF	lung
9	chr1:94724000-94726400	Enhancers	HUVEC	blood vessel
10	chr1:94724400-94727000	Enhancers	Muscle Satellite Cultured Cells	--
11	chr1:94725000-94726600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
12	chr1:94725200-94726400	Bivalent Enhancer	ES-I3 Cell Line	embryonic stem cell
13	chr1:94725200-94730600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr1:94725400-94730200	Weak transcription	NHEK	skin
15	chr1:94725400-94730400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr1:94725400-94730600	Weak transcription	Skeletal Muscle Male	skeletal muscle
17	chr1:94725400-94730800	Weak transcription	Psoas Muscle	Psoas
18	chr1:94725600-94730800	Weak transcription	A549	lung
19	chr1:94725800-94726200	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
20	chr1:94725800-94726400	Enhancers	Fetal Muscle Leg	muscle
21	chr1:94725800-94726800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
22	chr1:94725800-94727000	Enhancers	GM12878-XiMat	blood
23	chr1:94725800-94730000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr1:94725800-94730200	Weak transcription	HMEC	breast
25	chr1:94725800-94730400	Weak transcription	Skeletal Muscle Female	skeletal muscle
26	chr1:94725800-94730600	Weak transcription	Adipose Nuclei	Adipose
27	chr1:94725800-94730800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr1:94725800-94742600	Weak transcription	Placenta Amnion	Placenta Amnion
29	chr1:94726000-94730400	Weak transcription	NH-A	brain
30	chr1:94726000-94731400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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