Variant report

Variant rs6678486
Chromosome Location chr1:174963927-174963928
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:92 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:174924200-174967800 Weak transcription Brain Germinal Matrix brain
2 chr1:174935000-174964000 Strong transcription HUES48 Cell Line embryonic stem cell
3 chr1:174935000-174967000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr1:174938600-174965200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:174940000-174967600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr1:174941000-174968000 Weak transcription Gastric stomach
7 chr1:174944400-174967800 Weak transcription Aorta Aorta
8 chr1:174944800-174967800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr1:174944800-174968000 Weak transcription Spleen Spleen
10 chr1:174946000-174968000 Weak transcription Lung lung
11 chr1:174949000-174967800 Weak transcription Fetal Stomach stomach
12 chr1:174950600-174964400 Weak transcription NH-A brain
13 chr1:174952200-174967800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr1:174952400-174968000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:174952800-174965800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:174954800-174968000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:174956000-174967800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
18 chr1:174956200-174967400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:174959000-174965000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:174959600-174967400 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr1:174960000-174965800 Weak transcription HSMM muscle
22 chr1:174960000-174967200 Weak transcription Fetal Thymus thymus
23 chr1:174960000-174967200 Weak transcription Left Ventricle heart
24 chr1:174960000-174967800 Weak transcription Fetal Muscle Trunk muscle
25 chr1:174960000-174968000 Weak transcription Esophagus oesophagus
26 chr1:174960200-174964000 Weak transcription Fetal Kidney kidney
27 chr1:174960200-174964200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
28 chr1:174960200-174964200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:174960200-174964200 Weak transcription NHLF lung
30 chr1:174960200-174964400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr1:174960200-174964400 Weak transcription Osteobl bone
32 chr1:174960200-174965000 Weak transcription Duodenum Mucosa Duodenum
33 chr1:174960200-174965000 Weak transcription K562 blood
34 chr1:174960200-174965200 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr1:174960200-174965800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:174960200-174966400 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr1:174960200-174967000 Weak transcription Primary T cells from cord blood blood
38 chr1:174960200-174967000 Weak transcription Primary hematopoietic stem cells blood
39 chr1:174960200-174967000 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr1:174960200-174967200 Weak transcription Primary B cells from peripheral blood blood
41 chr1:174960200-174967200 Weak transcription Primary T cells fromperipheralblood blood
42 chr1:174960200-174967200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
43 chr1:174960200-174967200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:174960200-174967200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:174960200-174967400 Weak transcription Primary T helper cells fromperipheralblood blood
46 chr1:174960200-174967400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
47 chr1:174960200-174967400 Weak transcription Duodenum Smooth Muscle Duodenum
48 chr1:174960200-174967400 Weak transcription A549 lung
49 chr1:174960200-174967600 Weak transcription Brain Cingulate Gyrus brain
50 chr1:174960200-174967600 Weak transcription Brain Inferior Temporal Lobe brain

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