The 2.0 version of rSNPBase

Variant report

Variant rs6679707
Chromosome Location chr1:214460069-214460070
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214455400-214463200 Weak transcription Lung lung
2 chr1:214455600-214487800 Weak transcription Primary B cells from cord blood blood
3 chr1:214455600-214489000 Weak transcription Ovary ovary
4 chr1:214455800-214463200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:214456000-214469200 Weak transcription NH-A brain
6 chr1:214456200-214462400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr1:214456200-214463000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:214456200-214463800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr1:214456200-214469800 Weak transcription Fetal Lung lung
10 chr1:214456400-214463000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr1:214456400-214463000 Weak transcription Psoas Muscle Psoas
12 chr1:214456400-214463000 Weak transcription Right Atrium heart
13 chr1:214456400-214468800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr1:214456400-214470000 Weak transcription Placenta Amnion Placenta Amnion
15 chr1:214456400-214491800 Weak transcription Pancreas Pancrea
16 chr1:214456600-214460800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr1:214456600-214461200 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:214456600-214461200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:214456600-214463000 Weak transcription Fetal Muscle Leg muscle
20 chr1:214456600-214463000 Weak transcription Left Ventricle heart
21 chr1:214456600-214467800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
22 chr1:214456600-214483200 Weak transcription Primary B cells from peripheral blood blood
23 chr1:214456800-214461200 Weak transcription Primary T cells fromperipheralblood blood
24 chr1:214456800-214461400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
25 chr1:214456800-214463000 Weak transcription Spleen Spleen
26 chr1:214456800-214465000 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr1:214456800-214465400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:214456800-214468800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
29 chr1:214456800-214470000 Weak transcription HMEC breast
30 chr1:214457200-214461200 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:214457200-214461400 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr1:214457200-214461400 Weak transcription Hela-S3 cervix
33 chr1:214457200-214463000 Weak transcription Right Ventricle heart
34 chr1:214457200-214478200 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:214458600-214470000 Weak transcription A549 lung
36 chr1:214458800-214461000 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr1:214458800-214461200 Weak transcription HUES6 Cell Line embryonic stem cell
38 chr1:214458800-214462800 Weak transcription ES-WA7 Cell Line embryonic stem cell
39 chr1:214458800-214463200 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:214459000-214461200 Weak transcription Primary T cells from cord blood blood
41 chr1:214459000-214461400 Weak transcription NHEK skin
42 chr1:214459000-214461800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
43 chr1:214459200-214460800 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr1:214459200-214461200 Weak transcription Primary T helper cells PMA-I stimulated --
45 chr1:214459200-214461200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr1:214459200-214463000 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr1:214459200-214468200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr1:214459200-214469400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:214459200-214483000 Weak transcription Liver Liver
50 chr1:214459200-214491400 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015