The 2.0 version of rSNPBase

Variant report

Variant rs7522244
Chromosome Location chr1:214463100-214463101
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:214455400-214463200 Weak transcription Lung lung
2 chr1:214455600-214487800 Weak transcription Primary B cells from cord blood blood
3 chr1:214455600-214489000 Weak transcription Ovary ovary
4 chr1:214455800-214463200 Weak transcription Duodenum Smooth Muscle Duodenum
5 chr1:214456000-214469200 Weak transcription NH-A brain
6 chr1:214456200-214463800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr1:214456200-214469800 Weak transcription Fetal Lung lung
8 chr1:214456400-214468800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr1:214456400-214470000 Weak transcription Placenta Amnion Placenta Amnion
10 chr1:214456400-214491800 Weak transcription Pancreas Pancrea
11 chr1:214456600-214467800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr1:214456600-214483200 Weak transcription Primary B cells from peripheral blood blood
13 chr1:214456800-214465000 Weak transcription Monocytes-CD14+_RO01746 blood
14 chr1:214456800-214465400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:214456800-214468800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr1:214456800-214470000 Weak transcription HMEC breast
17 chr1:214457200-214478200 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr1:214458600-214470000 Weak transcription A549 lung
19 chr1:214458800-214463200 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr1:214459200-214468200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
21 chr1:214459200-214469400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr1:214459200-214483000 Weak transcription Liver Liver
23 chr1:214459200-214491400 Weak transcription Duodenum Mucosa Duodenum
24 chr1:214459400-214464400 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr1:214459600-214463200 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:214459600-214468800 Weak transcription GM12878-XiMat blood
27 chr1:214459800-214467800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr1:214461400-214465600 Enhancers Fetal Heart heart
29 chr1:214461400-214475800 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr1:214461600-214463600 Genic enhancers HepG2 liver
31 chr1:214461600-214475600 Weak transcription Primary T cells fromperipheralblood blood
32 chr1:214461600-214483000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr1:214461800-214468800 Weak transcription Primary T helper cells PMA-I stimulated --
34 chr1:214461800-214482800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
35 chr1:214462000-214469200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr1:214462000-214469600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
37 chr1:214462000-214469600 Weak transcription Hela-S3 cervix
38 chr1:214462000-214471400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr1:214462000-214491800 Weak transcription NHEK skin
40 chr1:214462200-214463200 ZNF genes & repeats Primary T cells from cord blood blood
41 chr1:214462200-214466400 Enhancers Fetal Intestine Small intestine
42 chr1:214462400-214463600 Bivalent Enhancer iPS-15b Cell Line embryonic stem cell
43 chr1:214462400-214463800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:214462400-214465200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
45 chr1:214462400-214470200 Weak transcription HSMMtube muscle
46 chr1:214462400-214475800 Weak transcription Primary T helper naive cells from peripheral blood blood
47 chr1:214462600-214463800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
48 chr1:214462600-214464200 Enhancers Fetal Intestine Large intestine
49 chr1:214462600-214465400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
50 chr1:214462600-214483200 Weak transcription Dnd41 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015