The 2.0 version of rSNPBase

Variant report

Variant rs6680474
Chromosome Location chr1:150359281-150359282
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150338400-150405200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:150339400-150372800 Weak transcription Fetal Muscle Leg muscle
3 chr1:150339400-150390600 Weak transcription Fetal Muscle Trunk muscle
4 chr1:150339600-150359800 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr1:150339600-150372800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr1:150339800-150368600 Weak transcription Primary hematopoietic stem cells blood
7 chr1:150339800-150390000 Weak transcription Thymus Thymus
8 chr1:150340000-150362000 Weak transcription Primary B cells from cord blood blood
9 chr1:150340000-150416800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:150340600-150366800 Weak transcription Fetal Brain Female brain
11 chr1:150342800-150361600 Weak transcription Fetal Thymus thymus
12 chr1:150343400-150378000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:150343600-150361400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:150343800-150359400 Weak transcription Duodenum Mucosa Duodenum
15 chr1:150343800-150378600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:150344000-150361600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr1:150346800-150359600 Weak transcription Primary monocytes fromperipheralblood blood
18 chr1:150346800-150361600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:150347000-150392400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:150347200-150359600 Weak transcription Dnd41 blood
21 chr1:150347200-150360000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:150347200-150360000 Weak transcription Pancreas Pancrea
23 chr1:150347200-150361000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
24 chr1:150347200-150361400 Weak transcription Primary B cells from peripheral blood blood
25 chr1:150347200-150361600 Weak transcription Psoas Muscle Psoas
26 chr1:150347200-150362000 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:150347200-150372400 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr1:150347200-150380000 Weak transcription iPS-18 Cell Line embryonic stem cell
29 chr1:150347800-150361600 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:150347800-150362200 Weak transcription Rectal Smooth Muscle rectum
31 chr1:150348000-150390400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
32 chr1:150348400-150372600 Weak transcription Hela-S3 cervix
33 chr1:150348600-150359600 Weak transcription Fetal Adrenal Gland Adrenal Gland
34 chr1:150348600-150361800 Weak transcription Brain Angular Gyrus brain
35 chr1:150348600-150362000 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:150348600-150362200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr1:150349000-150362000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:150349000-150372000 Weak transcription Fetal Lung lung
39 chr1:150352600-150363600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr1:150353600-150359600 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr1:150354600-150360000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr1:150355600-150369600 Weak transcription Fetal Stomach stomach
43 chr1:150355600-150382000 Weak transcription Lung lung
44 chr1:150356200-150360000 Enhancers Primary T killer memory cells from peripheral blood blood
45 chr1:150356200-150360800 Enhancers Liver Liver
46 chr1:150356400-150381400 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr1:150356600-150359600 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr1:150356600-150359800 Enhancers Fetal Heart heart
49 chr1:150356800-150359600 Weak transcription Adipose Nuclei Adipose
50 chr1:150356800-150359600 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015