The 2.0 version of rSNPBase

Variant report

Variant rs6695933
Chromosome Location chr1:171774239-171774240
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171765000-171774600 Weak transcription Pancreatic Islets Pancreatic Islet
2 chr1:171766000-171774800 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr1:171766200-171774400 Weak transcription Brain Substantia Nigra brain
4 chr1:171766200-171774600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr1:171766200-171774600 Weak transcription Primary T killer memory cells from peripheral blood blood
6 chr1:171766200-171775400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr1:171766200-171777200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr1:171766400-171777200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr1:171766600-171774600 Weak transcription Ovary ovary
10 chr1:171766600-171774800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
11 chr1:171766600-171774800 Weak transcription Placenta Placenta
12 chr1:171766600-171774800 Weak transcription HepG2 liver
13 chr1:171766800-171774600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
14 chr1:171766800-171774600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr1:171767000-171774600 Weak transcription K562 blood
16 chr1:171767000-171774800 Weak transcription Osteobl bone
17 chr1:171767000-171777200 Weak transcription HUES64 Cell Line embryonic stem cell
18 chr1:171767000-171778600 Weak transcription NHEK skin
19 chr1:171767200-171774600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:171767200-171774800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr1:171767200-171774800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr1:171767200-171777600 Weak transcription HMEC breast
23 chr1:171767400-171774600 Weak transcription Primary B cells from peripheral blood blood
24 chr1:171767400-171774800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:171767400-171774800 Weak transcription Psoas Muscle Psoas
26 chr1:171767400-171775000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
27 chr1:171767400-171777200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr1:171767600-171774800 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr1:171767600-171774800 Weak transcription Cortex derived primary cultured neurospheres brain
30 chr1:171767600-171775000 Weak transcription Primary T regulatory cells fromperipheralblood blood
31 chr1:171767800-171774600 Weak transcription GM12878-XiMat blood
32 chr1:171767800-171774800 Weak transcription Primary T cells fromperipheralblood blood
33 chr1:171767800-171774800 Weak transcription Aorta Aorta
34 chr1:171767800-171778800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr1:171767800-171781800 Weak transcription Thymus Thymus
36 chr1:171768000-171774600 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr1:171768000-171774800 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr1:171768000-171776600 Weak transcription Esophagus oesophagus
39 chr1:171768000-171778600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr1:171768200-171774800 Weak transcription Spleen Spleen
41 chr1:171768200-171774800 Weak transcription HSMM muscle
42 chr1:171768400-171775000 Weak transcription Fetal Muscle Leg muscle
43 chr1:171768400-171785600 Weak transcription Gastric stomach
44 chr1:171769600-171774400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr1:171769800-171775000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:171770200-171774800 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr1:171770200-171794600 Weak transcription Primary T cells from cord blood blood
48 chr1:171770600-171784800 Weak transcription Primary B cells from cord blood blood
49 chr1:171771000-171774400 Weak transcription Brain Inferior Temporal Lobe brain
50 chr1:171771000-171774600 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015