The 2.0 version of rSNPBase

Variant report

Variant rs7536142
Chromosome Location chr1:171770336-171770337
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:171751600-171770800 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:171752000-171773600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr1:171763800-171770400 Weak transcription Small Intestine intestine
4 chr1:171765000-171774600 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr1:171765600-171770800 Weak transcription Hela-S3 cervix
6 chr1:171766000-171772800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr1:171766000-171774800 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr1:171766200-171774400 Weak transcription Brain Substantia Nigra brain
9 chr1:171766200-171774600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:171766200-171774600 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr1:171766200-171775400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
12 chr1:171766200-171777200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr1:171766400-171777200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:171766600-171770800 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr1:171766600-171774600 Weak transcription Ovary ovary
16 chr1:171766600-171774800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
17 chr1:171766600-171774800 Weak transcription Placenta Placenta
18 chr1:171766600-171774800 Weak transcription HepG2 liver
19 chr1:171766800-171770400 Weak transcription Brain Hippocampus Middle brain
20 chr1:171766800-171770400 Weak transcription Fetal Kidney kidney
21 chr1:171766800-171771800 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:171766800-171772800 Weak transcription Right Ventricle heart
23 chr1:171766800-171774600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
24 chr1:171766800-171774600 Weak transcription Primary T killer naive cells fromperipheralblood blood
25 chr1:171767000-171770400 Weak transcription Brain Angular Gyrus brain
26 chr1:171767000-171770800 Weak transcription iPS-20b Cell Line embryonic stem cell
27 chr1:171767000-171770800 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr1:171767000-171771600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:171767000-171774600 Weak transcription K562 blood
30 chr1:171767000-171774800 Weak transcription Osteobl bone
31 chr1:171767000-171777200 Weak transcription HUES64 Cell Line embryonic stem cell
32 chr1:171767000-171778600 Weak transcription NHEK skin
33 chr1:171767200-171774600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr1:171767200-171774800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:171767200-171774800 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:171767200-171777600 Weak transcription HMEC breast
37 chr1:171767400-171770400 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr1:171767400-171770800 Weak transcription A549 lung
39 chr1:171767400-171771000 Weak transcription Fetal Brain Female brain
40 chr1:171767400-171771400 Weak transcription NHLF lung
41 chr1:171767400-171771600 Weak transcription Dnd41 blood
42 chr1:171767400-171773600 Weak transcription HUVEC blood vessel
43 chr1:171767400-171774600 Weak transcription Primary B cells from peripheral blood blood
44 chr1:171767400-171774800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr1:171767400-171774800 Weak transcription Psoas Muscle Psoas
46 chr1:171767400-171775000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr1:171767400-171777200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:171767600-171770800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr1:171767600-171772000 Weak transcription Lung lung
50 chr1:171767600-171774800 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015