Variant report

Variant	rs6707764
Chromosome Location	chr2:32067677-32067678
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:32061699..32064049-chr2:32066583..32068329,2	K562	blood:

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs6728551	1.00[AFR][1000 genomes]
rs6742921	1.00[AFR][1000 genomes]
rs6757674	1.00[AFR][1000 genomes]
rs7590836	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532648	chr2:31591498-32312698	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	39 gene(s)	inside rSNPs	diseases
2	nsv873777	chr2:32019747-32197123	Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
3	nsv949102	chr2:32030307-33011548	Strong transcription Weak transcription ZNF genes & repeats Enhancers Active TSS Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	71 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:32 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:32054400-32080000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
2	chr2:32054600-32067800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr2:32054600-32090400	Weak transcription	HSMM	muscle
4	chr2:32057200-32117200	Weak transcription	Muscle Satellite Cultured Cells	--
5	chr2:32061600-32172800	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr2:32063000-32092000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr2:32063600-32067800	Weak transcription	Liver	Liver
8	chr2:32064600-32142400	Weak transcription	NHDF-Ad	bronchial
9	chr2:32065000-32067800	Weak transcription	Osteobl	bone
10	chr2:32065000-32084800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr2:32065200-32068400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr2:32065400-32088400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr2:32065400-32123000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
14	chr2:32066000-32067800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr2:32066200-32068000	Weak transcription	Primary neutrophils fromperipheralblood	blood
16	chr2:32066200-32072000	Weak transcription	Fetal Intestine Small	intestine
17	chr2:32066200-32081200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr2:32066400-32068000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
19	chr2:32066400-32078400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
20	chr2:32066400-32079200	Weak transcription	Primary B cells from cord blood	blood
21	chr2:32066600-32067800	Weak transcription	A549	lung
22	chr2:32066600-32072400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
23	chr2:32066600-32077600	Weak transcription	HSMMtube	muscle
24	chr2:32066600-32100600	Weak transcription	Primary T cells from cord blood	blood
25	chr2:32066800-32067800	Weak transcription	Fetal Brain Female	brain
26	chr2:32066800-32068200	Weak transcription	Ovary	ovary
27	chr2:32066800-32074600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr2:32066800-32101800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
29	chr2:32066800-32103400	Weak transcription	Fetal Thymus	thymus
30	chr2:32067000-32106200	Weak transcription	Left Ventricle	heart
31	chr2:32067200-32106000	Weak transcription	Fetal Muscle Leg	muscle
32	chr2:32067600-32089600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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