Variant report

Variant	rs67144154
Chromosome Location	chr2:21448511-21448512
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10166144	0.80[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs10170323	0.81[EUR][1000 genomes]
rs10183198	0.81[EUR][1000 genomes]
rs13387827	0.81[EUR][1000 genomes]
rs13398007	0.81[EUR][1000 genomes]
rs312029	0.82[EUR][1000 genomes]
rs66774912	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv873728	chr2:21250914-21460786	Enhancers Bivalent Enhancer Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Flanking Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:21445600-21448800	Weak transcription	Spleen	Spleen
2	chr2:21446400-21448800	Weak transcription	Pancreas	Pancrea
3	chr2:21446400-21451200	Weak transcription	Aorta	Aorta
4	chr2:21448400-21448800	Weak transcription	Gastric	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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