Variant report

Variant rs671517
Chromosome Location chr19:20847874-20847875
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20844600-20848200 Weak transcription Left Ventricle heart
2 chr19:20844800-20848000 Weak transcription Right Atrium heart
3 chr19:20845000-20848800 ZNF genes & repeats Fetal Intestine Small intestine
4 chr19:20846000-20848000 Active TSS HepG2 liver
5 chr19:20846800-20848600 Enhancers Fetal Intestine Large intestine
6 chr19:20847000-20848000 Enhancers Primary Natural Killer cells fromperipheralblood blood
7 chr19:20847000-20848200 Enhancers Primary B cells from peripheral blood blood
8 chr19:20847200-20848000 Enhancers Primary T cells fromperipheralblood blood
9 chr19:20847200-20848200 Enhancers Pancreas Pancrea
10 chr19:20847600-20848400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr19:20847600-20848400 Enhancers HUES64 Cell Line embryonic stem cell
12 chr19:20847600-20848400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
13 chr19:20847600-20848600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr19:20847600-20848600 Active TSS Stomach Smooth Muscle stomach
15 chr19:20847600-20849000 Enhancers Placenta Placenta
16 chr19:20847800-20848000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr19:20847800-20848000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr19:20847800-20848000 Enhancers Primary mononuclear cells fromperipheralblood Blood
19 chr19:20847800-20848000 Flanking Active TSS Brain Angular Gyrus brain
20 chr19:20847800-20848000 Flanking Active TSS Brain Anterior Caudate brain
21 chr19:20847800-20848000 Flanking Active TSS Brain Hippocampus Middle brain
22 chr19:20847800-20848000 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
23 chr19:20847800-20848000 Flanking Active TSS Brain Substantia Nigra brain
24 chr19:20847800-20848000 Enhancers Ovary ovary
25 chr19:20847800-20848000 Flanking Active TSS Stomach Mucosa stomach
26 chr19:20847800-20848200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
27 chr19:20847800-20848200 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
28 chr19:20847800-20848200 Enhancers Cortex derived primary cultured neurospheres brain
29 chr19:20847800-20848200 Flanking Active TSS Brain Germinal Matrix brain
30 chr19:20847800-20848200 Flanking Active TSS Brain Inferior Temporal Lobe brain
31 chr19:20847800-20848200 ZNF genes & repeats Colonic Mucosa Colon
32 chr19:20847800-20848200 Active TSS Colon Smooth Muscle Colon
33 chr19:20847800-20848200 Bivalent Enhancer Fetal Muscle Trunk muscle
34 chr19:20847800-20848200 Enhancers Gastric stomach
35 chr19:20847800-20848200 Enhancers K562 blood
36 chr19:20847800-20848400 Enhancers H1 Cell Line embryonic stem cell
37 chr19:20847800-20848400 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
38 chr19:20847800-20848400 Enhancers HUES6 Cell Line embryonic stem cell
39 chr19:20847800-20848400 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
40 chr19:20847800-20848400 Enhancers iPS-15b Cell Line embryonic stem cell
41 chr19:20847800-20848400 Flanking Active TSS Adipose Nuclei Adipose
42 chr19:20847800-20848400 Flanking Active TSS Brain Cingulate Gyrus brain
43 chr19:20847800-20848400 Enhancers Fetal Heart heart
44 chr19:20847800-20848400 Enhancers Fetal Lung lung
45 chr19:20847800-20848400 Enhancers Rectal Smooth Muscle rectum
46 chr19:20847800-20848400 Flanking Active TSS Skeletal Muscle Male skeletal muscle
47 chr19:20847800-20848600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
48 chr19:20847800-20848600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
49 chr19:20847800-20848600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr19:20847800-20848600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

Quick Search:


  
Input of quick search could be:

what's new

Quick links