The 2.0 version of rSNPBase

Variant report

Variant rs6720438
Chromosome Location chr2:173151589-173151590
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:173145400-173154400 Enhancers Breast Myoepithelial Primary Cells Breast
2 chr2:173146400-173152000 Enhancers HSMM muscle
3 chr2:173146400-173153600 Enhancers HSMMtube muscle
4 chr2:173146400-173154400 Enhancers HUVEC blood vessel
5 chr2:173147200-173153400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
6 chr2:173147200-173153600 Enhancers Fetal Muscle Leg muscle
7 chr2:173147800-173152400 Enhancers Skeletal Muscle Male skeletal muscle
8 chr2:173147800-173153000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr2:173147800-173153000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr2:173148400-173151600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
11 chr2:173149000-173151600 Enhancers Primary T helper naive cells fromperipheralblood blood
12 chr2:173149000-173151800 Enhancers Primary T helper cells PMA-I stimulated --
13 chr2:173149200-173151600 Enhancers Primary T cells from cord blood blood
14 chr2:173149400-173151600 Enhancers Primary T helper cells fromperipheralblood blood
15 chr2:173149800-173151600 Enhancers Primary T helper 17 cells PMA-I stimulated --
16 chr2:173149800-173151600 Enhancers Primary T killer memory cells from peripheral blood blood
17 chr2:173149800-173151800 Enhancers Primary T helper naive cells from peripheral blood blood
18 chr2:173150000-173151600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
19 chr2:173150000-173151800 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr2:173150000-173153000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
21 chr2:173150200-173153200 Weak transcription NHEK skin
22 chr2:173150200-173153400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr2:173150400-173158400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr2:173150400-173158400 Weak transcription Brain Substantia Nigra brain
25 chr2:173150600-173151800 Weak transcription NH-A brain
26 chr2:173150600-173152800 Weak transcription Muscle Satellite Cultured Cells --
27 chr2:173150600-173152800 Weak transcription Duodenum Mucosa Duodenum
28 chr2:173150600-173152800 Weak transcription Left Ventricle heart
29 chr2:173150600-173152800 Weak transcription Ovary ovary
30 chr2:173150600-173153000 Weak transcription Brain Anterior Caudate brain
31 chr2:173150600-173153000 Weak transcription HMEC breast
32 chr2:173150600-173158200 Weak transcription Fetal Kidney kidney
33 chr2:173150800-173152200 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr2:173150800-173152400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr2:173150800-173152600 Weak transcription Adipose Nuclei Adipose
36 chr2:173150800-173152600 Weak transcription Right Atrium heart
37 chr2:173150800-173152600 Weak transcription Spleen Spleen
38 chr2:173150800-173152800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr2:173150800-173152800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr2:173150800-173153000 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr2:173150800-173158600 Weak transcription Brain Hippocampus Middle brain
42 chr2:173151000-173152000 Weak transcription Fetal Heart heart
43 chr2:173151000-173152400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr2:173151000-173152600 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr2:173151000-173153000 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr2:173151000-173158200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr2:173151200-173153200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr2:173151400-173151600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr2:173151400-173153600 Enhancers Skeletal Muscle Female skeletal muscle
50 chr2:173151400-173158600 Weak transcription Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015