The 2.0 version of rSNPBase

Variant report

Variant rs6728863
Chromosome Location chr2:15389241-15389242
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:15352400-15389400 Weak transcription Fetal Thymus thymus
2 chr2:15352800-15402000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr2:15353000-15391600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:15357600-15391600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr2:15359200-15391600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
6 chr2:15364400-15399400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr2:15365000-15442400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr2:15369000-15391200 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr2:15369200-15411800 Weak transcription HSMMtube muscle
10 chr2:15371200-15391800 Weak transcription Aorta Aorta
11 chr2:15371400-15468400 Weak transcription Esophagus oesophagus
12 chr2:15371600-15399600 Weak transcription Gastric stomach
13 chr2:15372800-15391800 Weak transcription Pancreas Pancrea
14 chr2:15372800-15393400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr2:15372800-15393800 Weak transcription Fetal Kidney kidney
16 chr2:15372800-15394200 Weak transcription Fetal Muscle Trunk muscle
17 chr2:15372800-15399400 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr2:15372800-15400600 Weak transcription Ovary ovary
19 chr2:15372800-15411400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
20 chr2:15372800-15414400 Weak transcription Fetal Adrenal Gland Adrenal Gland
21 chr2:15372800-15414400 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr2:15372800-15414400 Weak transcription Rectal Mucosa Donor 31 rectum
23 chr2:15372800-15432600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr2:15373000-15414000 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr2:15373200-15396000 Weak transcription Primary B cells from peripheral blood blood
26 chr2:15374600-15398400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr2:15374800-15394000 Weak transcription Adipose Nuclei Adipose
28 chr2:15374800-15395600 Weak transcription Liver Liver
29 chr2:15374800-15399600 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr2:15374800-15413200 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr2:15375000-15390600 Weak transcription Fetal Lung lung
32 chr2:15375000-15446000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
33 chr2:15375000-15469000 Weak transcription Psoas Muscle Psoas
34 chr2:15375200-15392400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr2:15375200-15399200 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr2:15375200-15414400 Weak transcription Stomach Smooth Muscle stomach
37 chr2:15375400-15391200 Weak transcription Primary hematopoietic stem cells blood
38 chr2:15376000-15391800 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr2:15376200-15395600 Weak transcription HepG2 liver
40 chr2:15378800-15391600 Weak transcription Primary B cells from cord blood blood
41 chr2:15378800-15399400 Weak transcription Fetal Intestine Large intestine
42 chr2:15381400-15391200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
43 chr2:15382200-15414400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr2:15383600-15414400 Weak transcription Skeletal Muscle Female skeletal muscle
45 chr2:15384600-15415200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr2:15385200-15391200 Weak transcription K562 blood
47 chr2:15385600-15391800 Weak transcription Fetal Intestine Small intestine
48 chr2:15385600-15403000 Weak transcription Fetal Stomach stomach
49 chr2:15385800-15392000 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr2:15386000-15391800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015