The 2.0 version of rSNPBase

Variant report

Variant rs2042144
Chromosome Location chr2:15393316-15393317
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:15352800-15402000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:15364400-15399400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
3 chr2:15365000-15442400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr2:15369200-15411800 Weak transcription HSMMtube muscle
5 chr2:15371400-15468400 Weak transcription Esophagus oesophagus
6 chr2:15371600-15399600 Weak transcription Gastric stomach
7 chr2:15372800-15393400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr2:15372800-15393800 Weak transcription Fetal Kidney kidney
9 chr2:15372800-15394200 Weak transcription Fetal Muscle Trunk muscle
10 chr2:15372800-15399400 Weak transcription Primary T helper naive cells fromperipheralblood blood
11 chr2:15372800-15400600 Weak transcription Ovary ovary
12 chr2:15372800-15411400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
13 chr2:15372800-15414400 Weak transcription Fetal Adrenal Gland Adrenal Gland
14 chr2:15372800-15414400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr2:15372800-15414400 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr2:15372800-15432600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr2:15373000-15414000 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr2:15373200-15396000 Weak transcription Primary B cells from peripheral blood blood
19 chr2:15374600-15398400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr2:15374800-15394000 Weak transcription Adipose Nuclei Adipose
21 chr2:15374800-15395600 Weak transcription Liver Liver
22 chr2:15374800-15399600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr2:15374800-15413200 Weak transcription Sigmoid Colon Sigmoid Colon
24 chr2:15375000-15446000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr2:15375000-15469000 Weak transcription Psoas Muscle Psoas
26 chr2:15375200-15399200 Weak transcription Primary T helper cells fromperipheralblood blood
27 chr2:15375200-15414400 Weak transcription Stomach Smooth Muscle stomach
28 chr2:15376200-15395600 Weak transcription HepG2 liver
29 chr2:15378800-15399400 Weak transcription Fetal Intestine Large intestine
30 chr2:15382200-15414400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr2:15383600-15414400 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr2:15384600-15415200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr2:15385600-15403000 Weak transcription Fetal Stomach stomach
34 chr2:15387200-15414400 Weak transcription Lung lung
35 chr2:15387400-15394000 Weak transcription Left Ventricle heart
36 chr2:15391400-15399600 Weak transcription Fetal Lung lung
37 chr2:15391800-15393600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr2:15391800-15414600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
39 chr2:15392000-15395800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr2:15392000-15397600 Weak transcription Fetal Intestine Small intestine
41 chr2:15392000-15411400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr2:15392200-15395800 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr2:15392200-15396600 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr2:15392200-15399400 Weak transcription Aorta Aorta
45 chr2:15392200-15400600 Weak transcription Pancreas Pancrea
46 chr2:15392200-15411800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr2:15392400-15394600 Weak transcription Primary B cells from cord blood blood
48 chr2:15392400-15399400 Weak transcription Primary T cells from cord blood blood
49 chr2:15392400-15463400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr2:15392800-15393400 Enhancers K562 blood

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Last update: Aug 31, 2015