The 2.0 version of rSNPBase

Variant report

Variant rs7575687
Chromosome Location chr2:15421848-15421849
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:15365000-15442400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:15371400-15468400 Weak transcription Esophagus oesophagus
3 chr2:15372800-15432600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:15375000-15446000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr2:15375000-15469000 Weak transcription Psoas Muscle Psoas
6 chr2:15392400-15463400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr2:15396000-15426000 Weak transcription Thymus Thymus
8 chr2:15399600-15426600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
9 chr2:15399600-15453600 Weak transcription Brain Cingulate Gyrus brain
10 chr2:15399800-15427200 Weak transcription Right Ventricle heart
11 chr2:15399800-15440600 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr2:15399800-15470600 Weak transcription HUVEC blood vessel
13 chr2:15400000-15422600 Weak transcription Aorta Aorta
14 chr2:15400000-15422600 Weak transcription Fetal Lung lung
15 chr2:15400000-15430600 Weak transcription Primary T killer naive cells fromperipheralblood blood
16 chr2:15400600-15468400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr2:15400800-15456400 Weak transcription Pancreas Pancrea
18 chr2:15401200-15469600 Weak transcription Small Intestine intestine
19 chr2:15401400-15431800 Weak transcription H9 Cell Line embryonic stem cell
20 chr2:15402400-15431000 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr2:15402400-15457000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr2:15403200-15425600 Weak transcription HUES6 Cell Line embryonic stem cell
23 chr2:15406200-15438600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr2:15406200-15440800 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr2:15407400-15450000 Weak transcription HMEC breast
26 chr2:15407600-15426800 Weak transcription Placenta Placenta
27 chr2:15411400-15433400 Strong transcription Primary T cells from cord blood blood
28 chr2:15411800-15427000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr2:15412000-15422800 Weak transcription Brain Angular Gyrus brain
30 chr2:15412000-15437400 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr2:15412000-15440800 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr2:15412400-15426800 Weak transcription HSMMtube muscle
33 chr2:15412600-15426000 Weak transcription Brain Hippocampus Middle brain
34 chr2:15412600-15426400 Weak transcription Brain Substantia Nigra brain
35 chr2:15412600-15432200 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr2:15412800-15426200 Weak transcription Fetal Brain Female brain
37 chr2:15413000-15440600 Weak transcription NHLF lung
38 chr2:15413400-15424400 Weak transcription NHDF-Ad bronchial
39 chr2:15413800-15427200 Weak transcription Rectal Smooth Muscle rectum
40 chr2:15413800-15431400 Weak transcription Fetal Brain Male brain
41 chr2:15413800-15453600 Weak transcription Colon Smooth Muscle Colon
42 chr2:15414400-15426600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
43 chr2:15414600-15426400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr2:15415200-15431200 Weak transcription Sigmoid Colon Sigmoid Colon
45 chr2:15415200-15437000 Weak transcription Hela-S3 cervix
46 chr2:15415400-15427200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr2:15415600-15426600 Weak transcription Muscle Satellite Cultured Cells --
48 chr2:15416000-15426000 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr2:15416000-15426200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr2:15416000-15426600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015