The 2.0 version of rSNPBase

Variant report

Variant rs962616
Chromosome Location chr2:15413179-15413180
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:15365000-15442400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr2:15371400-15468400 Weak transcription Esophagus oesophagus
3 chr2:15372800-15414400 Weak transcription Fetal Adrenal Gland Adrenal Gland
4 chr2:15372800-15414400 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr2:15372800-15414400 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr2:15372800-15432600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr2:15373000-15414000 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr2:15374800-15413200 Weak transcription Sigmoid Colon Sigmoid Colon
9 chr2:15375000-15446000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
10 chr2:15375000-15469000 Weak transcription Psoas Muscle Psoas
11 chr2:15375200-15414400 Weak transcription Stomach Smooth Muscle stomach
12 chr2:15382200-15414400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr2:15383600-15414400 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr2:15384600-15415200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr2:15387200-15414400 Weak transcription Lung lung
16 chr2:15391800-15414600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr2:15392400-15463400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr2:15396000-15426000 Weak transcription Thymus Thymus
19 chr2:15399200-15415400 Weak transcription NH-A brain
20 chr2:15399600-15414600 Weak transcription Fetal Muscle Trunk muscle
21 chr2:15399600-15426600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
22 chr2:15399600-15453600 Weak transcription Brain Cingulate Gyrus brain
23 chr2:15399800-15427200 Weak transcription Right Ventricle heart
24 chr2:15399800-15440600 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr2:15399800-15470600 Weak transcription HUVEC blood vessel
26 chr2:15400000-15413200 Weak transcription HepG2 liver
27 chr2:15400000-15414400 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr2:15400000-15414400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr2:15400000-15415600 Weak transcription Spleen Spleen
30 chr2:15400000-15420800 Weak transcription Gastric stomach
31 chr2:15400000-15422600 Weak transcription Aorta Aorta
32 chr2:15400000-15422600 Weak transcription Fetal Lung lung
33 chr2:15400000-15430600 Weak transcription Primary T killer naive cells fromperipheralblood blood
34 chr2:15400200-15413200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr2:15400200-15413400 Weak transcription Primary T helper cells PMA-I stimulated --
36 chr2:15400200-15414400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
37 chr2:15400200-15415200 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr2:15400600-15468400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr2:15400800-15414200 Weak transcription Primary B cells from peripheral blood blood
40 chr2:15400800-15415600 Weak transcription Dnd41 blood
41 chr2:15400800-15417800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
42 chr2:15400800-15456400 Weak transcription Pancreas Pancrea
43 chr2:15401000-15421800 Weak transcription GM12878-XiMat blood
44 chr2:15401200-15469600 Weak transcription Small Intestine intestine
45 chr2:15401400-15431800 Weak transcription H9 Cell Line embryonic stem cell
46 chr2:15402400-15414400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr2:15402400-15431000 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr2:15402400-15457000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
49 chr2:15403200-15425600 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr2:15403600-15414400 Weak transcription Liver Liver

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Last update: Aug 31, 2015