The 2.0 version of rSNPBase

Variant report

Variant rs888636
Chromosome Location chr2:15456209-15456210
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:15371400-15468400 Weak transcription Esophagus oesophagus
2 chr2:15375000-15469000 Weak transcription Psoas Muscle Psoas
3 chr2:15392400-15463400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr2:15399800-15470600 Weak transcription HUVEC blood vessel
5 chr2:15400600-15468400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr2:15400800-15456400 Weak transcription Pancreas Pancrea
7 chr2:15401200-15469600 Weak transcription Small Intestine intestine
8 chr2:15402400-15457000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr2:15416200-15478200 Weak transcription NH-A brain
10 chr2:15421000-15494800 Weak transcription Placenta Amnion Placenta Amnion
11 chr2:15425000-15458000 Weak transcription Pancreatic Islets Pancreatic Islet
12 chr2:15426800-15473200 Weak transcription Brain Hippocampus Middle brain
13 chr2:15426800-15520000 Weak transcription Colonic Mucosa Colon
14 chr2:15427400-15456600 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr2:15427400-15467800 Weak transcription Primary neutrophils fromperipheralblood blood
16 chr2:15427400-15470200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr2:15427600-15467800 Weak transcription Brain Substantia Nigra brain
18 chr2:15433000-15458200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr2:15433000-15469000 Weak transcription Fetal Brain Male brain
20 chr2:15437400-15468200 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr2:15437800-15467600 Weak transcription A549 lung
22 chr2:15437800-15475800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
23 chr2:15439400-15467800 Weak transcription Brain Inferior Temporal Lobe brain
24 chr2:15441000-15499800 Weak transcription NHLF lung
25 chr2:15441400-15463600 Weak transcription Right Ventricle heart
26 chr2:15442600-15468400 Weak transcription Fetal Heart heart
27 chr2:15442800-15456600 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr2:15442800-15462800 Weak transcription Osteobl bone
29 chr2:15442800-15467200 Weak transcription NHDF-Ad bronchial
30 chr2:15442800-15513600 Weak transcription HSMMtube muscle
31 chr2:15443000-15458400 Weak transcription Fetal Lung lung
32 chr2:15443200-15456400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr2:15443200-15456400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr2:15443200-15456600 Weak transcription Gastric stomach
35 chr2:15443200-15463200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr2:15443600-15469000 Weak transcription Muscle Satellite Cultured Cells --
37 chr2:15443800-15480600 Weak transcription Fetal Kidney kidney
38 chr2:15444400-15468800 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr2:15445400-15467600 Weak transcription Brain Anterior Caudate brain
40 chr2:15445600-15463400 Weak transcription Stomach Smooth Muscle stomach
41 chr2:15445600-15469200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr2:15445800-15463200 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr2:15446000-15463000 Weak transcription Left Ventricle heart
44 chr2:15446800-15456600 Weak transcription HUES64 Cell Line embryonic stem cell
45 chr2:15446800-15466000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
46 chr2:15447400-15456400 Weak transcription Lung lung
47 chr2:15447400-15458000 Weak transcription Fetal Muscle Leg muscle
48 chr2:15447400-15466800 Weak transcription HSMM muscle
49 chr2:15447400-15467800 Weak transcription Skeletal Muscle Female skeletal muscle
50 chr2:15447400-15474800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015