The 2.0 version of rSNPBase

Variant report

Variant rs4668891
Chromosome Location chr2:15401476-15401477
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:15352800-15402000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr2:15365000-15442400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr2:15369200-15411800 Weak transcription HSMMtube muscle
4 chr2:15371400-15468400 Weak transcription Esophagus oesophagus
5 chr2:15372800-15411400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr2:15372800-15414400 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr2:15372800-15414400 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr2:15372800-15414400 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr2:15372800-15432600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr2:15373000-15414000 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr2:15374800-15413200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr2:15375000-15446000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
13 chr2:15375000-15469000 Weak transcription Psoas Muscle Psoas
14 chr2:15375200-15414400 Weak transcription Stomach Smooth Muscle stomach
15 chr2:15382200-15414400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr2:15383600-15414400 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr2:15384600-15415200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr2:15385600-15403000 Weak transcription Fetal Stomach stomach
19 chr2:15387200-15414400 Weak transcription Lung lung
20 chr2:15391800-15414600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
21 chr2:15392000-15411400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr2:15392200-15411800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr2:15392400-15463400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr2:15396000-15426000 Weak transcription Thymus Thymus
25 chr2:15398000-15411000 Weak transcription Muscle Satellite Cultured Cells --
26 chr2:15398600-15411600 Weak transcription NHLF lung
27 chr2:15399000-15403000 Weak transcription Liver Liver
28 chr2:15399200-15402800 Enhancers iPS-18 Cell Line embryonic stem cell
29 chr2:15399200-15405000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr2:15399200-15415400 Weak transcription NH-A brain
31 chr2:15399600-15402200 Strong transcription K562 blood
32 chr2:15399600-15414600 Weak transcription Fetal Muscle Trunk muscle
33 chr2:15399600-15426600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr2:15399600-15453600 Weak transcription Brain Cingulate Gyrus brain
35 chr2:15399800-15401600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
36 chr2:15399800-15405600 Weak transcription Fetal Heart heart
37 chr2:15399800-15411200 Weak transcription Brain Angular Gyrus brain
38 chr2:15399800-15411200 Weak transcription Brain Hippocampus Middle brain
39 chr2:15399800-15411800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr2:15399800-15427200 Weak transcription Right Ventricle heart
41 chr2:15399800-15440600 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr2:15399800-15470600 Weak transcription HUVEC blood vessel
43 chr2:15400000-15402000 Enhancers iPS-20b Cell Line embryonic stem cell
44 chr2:15400000-15402400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
45 chr2:15400000-15404000 Weak transcription Colon Smooth Muscle Colon
46 chr2:15400000-15404600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr2:15400000-15404600 Weak transcription Adipose Nuclei Adipose
48 chr2:15400000-15411400 Weak transcription Brain Inferior Temporal Lobe brain
49 chr2:15400000-15412200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr2:15400000-15413200 Weak transcription HepG2 liver

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Last update: Aug 31, 2015