Variant report

Variant	rs6731662
Chromosome Location	chr2:185664433-185664434
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10931151	1.00[YRI][hapmap]
rs11887478	0.96[YRI][hapmap]
rs11892820	0.96[YRI][hapmap]
rs11896638	0.89[YRI][hapmap]
rs11898003	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs11899942	1.00[YRI][hapmap];0.94[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs12104875	0.85[YRI][hapmap]
rs12105548	0.84[YRI][hapmap]
rs59102345	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs59318193	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs6434101	0.89[YRI][hapmap]
rs6755385	1.00[YRI][hapmap]
rs73978098	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs73980326	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs7579459	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532412	chr2:185347334-186108701	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
2	nsv834484	chr2:185550006-185762728	Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:185663800-185664600	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr2:185664000-185664600	Enhancers	Monocytes-CD14+_RO01746	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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