Variant report

Variant rs674440
Chromosome Location chr19:39518275-39518276
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:39503600-39520200 Weak transcription Liver Liver
2 chr19:39513000-39521600 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr19:39513000-39521600 Weak transcription Right Atrium heart
4 chr19:39514000-39521400 Weak transcription Pancreas Pancrea
5 chr19:39514000-39522200 Weak transcription Gastric stomach
6 chr19:39514400-39520400 Weak transcription Fetal Intestine Large intestine
7 chr19:39514400-39521600 Weak transcription Placenta Amnion Placenta Amnion
8 chr19:39514400-39521800 Weak transcription Colon Smooth Muscle Colon
9 chr19:39514600-39521400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
10 chr19:39514800-39518600 Strong transcription Breast Myoepithelial Primary Cells Breast
11 chr19:39514800-39519600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr19:39514800-39520000 Strong transcription Brain Cingulate Gyrus brain
13 chr19:39515200-39521600 Weak transcription Rectal Smooth Muscle rectum
14 chr19:39515400-39519000 Strong transcription Brain Hippocampus Middle brain
15 chr19:39515600-39518400 Strong transcription Brain Inferior Temporal Lobe brain
16 chr19:39515600-39518600 Strong transcription Brain Substantia Nigra brain
17 chr19:39515600-39518800 Strong transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr19:39515800-39518400 Strong transcription Adipose Nuclei Adipose
19 chr19:39515800-39518600 Strong transcription Ovary ovary
20 chr19:39516200-39521000 Weak transcription K562 blood
21 chr19:39516200-39521600 Weak transcription Right Ventricle heart
22 chr19:39516400-39522200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr19:39516600-39518400 ZNF genes & repeats A549 lung
24 chr19:39516600-39518600 Strong transcription Brain Anterior Caudate brain
25 chr19:39516800-39518400 Strong transcription Duodenum Smooth Muscle Duodenum
26 chr19:39516800-39518600 ZNF genes & repeats Fetal Intestine Small intestine
27 chr19:39517400-39518400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
28 chr19:39517400-39518400 Strong transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr19:39517400-39518400 ZNF genes & repeats Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr19:39517400-39518600 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
31 chr19:39517400-39518600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr19:39517600-39518400 Strong transcription Pancreatic Islets Pancreatic Islet
33 chr19:39517600-39518600 ZNF genes & repeats H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr19:39517600-39518600 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
35 chr19:39517600-39518600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
36 chr19:39517600-39519000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr19:39517800-39518400 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
38 chr19:39517800-39518400 Strong transcription Brain Germinal Matrix brain
39 chr19:39517800-39518400 ZNF genes & repeats Fetal Stomach stomach
40 chr19:39517800-39518600 ZNF genes & repeats H9 Cell Line embryonic stem cell
41 chr19:39517800-39518600 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
42 chr19:39518000-39518400 ZNF genes & repeats H1 Cell Line embryonic stem cell
43 chr19:39518000-39518400 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr19:39518000-39518400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr19:39518000-39518400 ZNF genes & repeats Aorta Aorta
46 chr19:39518000-39518400 ZNF genes & repeats Fetal Kidney kidney
47 chr19:39518000-39518400 ZNF genes & repeats Fetal Lung lung
48 chr19:39518000-39518400 ZNF genes & repeats Stomach Smooth Muscle stomach
49 chr19:39518000-39518600 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
50 chr19:39518000-39518600 Strong transcription Fetal Heart heart

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