Variant report

Variant	rs6748343
Chromosome Location	chr2:86147050-86147051
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:86114472..86116117-chr2:86147014..86149463,2	K562	blood:
2	chr2:86140957..86144673-chr2:86146213..86150354,4	K562	blood:
3	chr2:86146663..86150858-chr2:86151745..86155490,4	K562	blood:

Variant related genes	Relation type
ENSG00000115525	Chromatin interaction

rs_ID	r²[population]
rs10175597	1.00[AMR][1000 genomes]
rs10184159	1.00[AMR][1000 genomes]
rs12328075	1.00[AMR][1000 genomes]
rs13387316	1.00[AMR][1000 genomes]
rs13393659	1.00[AMR][1000 genomes]
rs13403541	1.00[AMR][1000 genomes]
rs13413723	1.00[AMR][1000 genomes]
rs13422309	1.00[AMR][1000 genomes]
rs13430553	1.00[AMR][1000 genomes]
rs17026886	1.00[AMR][1000 genomes]
rs28631015	1.00[AMR][1000 genomes]
rs57062037	1.00[AMR][1000 genomes]
rs57817729	1.00[AMR][1000 genomes]
rs6755228	1.00[AMR][1000 genomes]
rs9309631	1.00[AMR][1000 genomes]

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86133200-86149200	Weak transcription	Stomach Smooth Muscle	stomach
2	chr2:86133200-86152000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr2:86134400-86148000	Weak transcription	Thymus	Thymus
4	chr2:86135400-86148000	Weak transcription	Pancreas	Pancrea
5	chr2:86135400-86151600	Weak transcription	Fetal Muscle Trunk	muscle
6	chr2:86135400-86151600	Weak transcription	Lung	lung
7	chr2:86135400-86152600	Weak transcription	Psoas Muscle	Psoas
8	chr2:86138200-86151600	Weak transcription	Fetal Muscle Leg	muscle
9	chr2:86138600-86147400	Weak transcription	Fetal Thymus	thymus
10	chr2:86140000-86148000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr2:86142000-86147200	Weak transcription	Adipose Nuclei	Adipose
12	chr2:86142200-86155800	Weak transcription	Primary T cells from cord blood	blood
13	chr2:86142400-86148000	Weak transcription	K562	blood
14	chr2:86142400-86151800	Weak transcription	Primary B cells from peripheral blood	blood
15	chr2:86142400-86157800	Weak transcription	Aorta	Aorta
16	chr2:86142600-86147400	Weak transcription	Liver	Liver
17	chr2:86142600-86151000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr2:86142600-86151600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr2:86143200-86148200	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr2:86143200-86148200	Weak transcription	Brain Angular Gyrus	brain
21	chr2:86143200-86148400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr2:86143200-86150800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr2:86143400-86147800	Weak transcription	Brain Inferior Temporal Lobe	brain
24	chr2:86143400-86148000	Weak transcription	Brain Cingulate Gyrus	brain
25	chr2:86143400-86148200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr2:86143400-86148200	Weak transcription	Ovary	ovary
27	chr2:86143400-86148400	Weak transcription	Colon Smooth Muscle	Colon
28	chr2:86143600-86147800	Weak transcription	Brain Anterior Caudate	brain
29	chr2:86143600-86148000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
30	chr2:86143600-86148000	Weak transcription	Brain Substantia Nigra	brain
31	chr2:86145200-86148200	Weak transcription	Stomach Mucosa	stomach
32	chr2:86145600-86147800	Weak transcription	A549	lung
33	chr2:86145600-86151000	Weak transcription	HMEC	breast
34	chr2:86145800-86148200	Weak transcription	NHDF-Ad	bronchial
35	chr2:86146000-86148000	Weak transcription	Hela-S3	cervix
36	chr2:86146400-86147200	Weak transcription	Brain Hippocampus Middle	brain
37	chr2:86146800-86148600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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