Variant report

Variant	rs6752041
Chromosome Location	chr2:205089404-205089405
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs11891596	1.00[EUR][1000 genomes]
rs16824667	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2216958	1.00[EUR][1000 genomes]
rs6709185	1.00[EUR][1000 genomes]
rs6751197	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6751909	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518928	chr2:205084439-205090645	Enhancers Weak transcription Bivalent Enhancer	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:205086600-205090800	Weak transcription	Aorta	Aorta
2	chr2:205087400-205089600	Enhancers	Fetal Muscle Leg	muscle
3	chr2:205088400-205092800	Weak transcription	Fetal Brain Female	brain
4	chr2:205088400-205093200	Enhancers	Brain Germinal Matrix	brain
5	chr2:205088800-205091000	Weak transcription	Gastric	stomach
6	chr2:205089000-205089800	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr2:205089000-205089800	Enhancers	HUES6 Cell Line	embryonic stem cell
8	chr2:205089000-205093000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
9	chr2:205089200-205089600	Enhancers	Fetal Lung	lung
10	chr2:205089200-205089800	Bivalent Enhancer	HUES64 Cell Line	embryonic stem cell
11	chr2:205089400-205089600	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr2:205089400-205089600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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