Variant report

Variant	rs6754345
Chromosome Location	chr2:67156416-67156417
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs17032737	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs17032753	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6744361	1.00[AMR][1000 genomes]
rs7566595	1.00[AMR][1000 genomes]
rs7593203	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2762259	chr2:67109728-67165987	Enhancers Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67145400-67156600	Weak transcription	Fetal Heart	heart
2	chr2:67152600-67156800	Weak transcription	Ovary	ovary
3	chr2:67152600-67157000	Weak transcription	Hela-S3	cervix
4	chr2:67152600-67157000	Weak transcription	NHDF-Ad	bronchial
5	chr2:67152800-67157000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr2:67152800-67157000	Weak transcription	Pancreas	Pancrea
7	chr2:67153000-67157000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr2:67153200-67157200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr2:67153600-67156800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr2:67154600-67156800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
11	chr2:67156200-67156600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr2:67156200-67156800	Enhancers	HMEC	breast
13	chr2:67156400-67156800	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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