The 2.0 version of rSNPBase

Variant report

Variant rs6767229
Chromosome Location chr3:52764152-52764153
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:114 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52741400-52765600 Weak transcription Aorta Aorta
2 chr3:52741400-52766600 Weak transcription Rectal Smooth Muscle rectum
3 chr3:52741600-52765600 Weak transcription Esophagus oesophagus
4 chr3:52741600-52804000 Weak transcription Psoas Muscle Psoas
5 chr3:52742000-52765600 Weak transcription Brain Cingulate Gyrus brain
6 chr3:52742000-52766400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr3:52742000-52766400 Weak transcription NHLF lung
8 chr3:52742000-52766600 Weak transcription Hela-S3 cervix
9 chr3:52742000-52766600 Weak transcription NHEK skin
10 chr3:52742200-52767200 Weak transcription Fetal Brain Male brain
11 chr3:52742200-52768800 Weak transcription Colon Smooth Muscle Colon
12 chr3:52742400-52764200 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr3:52742400-52771400 Weak transcription K562 blood
14 chr3:52742400-52772800 Weak transcription Pancreas Pancrea
15 chr3:52742600-52766000 Weak transcription HUVEC blood vessel
16 chr3:52743000-52766600 Weak transcription NH-A brain
17 chr3:52743000-52766600 Weak transcription NHDF-Ad bronchial
18 chr3:52743200-52766600 Weak transcription Osteobl bone
19 chr3:52743600-52764200 Weak transcription Muscle Satellite Cultured Cells --
20 chr3:52744000-52764200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr3:52744000-52764200 Weak transcription Fetal Kidney kidney
22 chr3:52744000-52765400 Weak transcription HMEC breast
23 chr3:52744600-52764200 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr3:52744800-52767000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr3:52746800-52764400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr3:52747000-52765400 Weak transcription Spleen Spleen
27 chr3:52747000-52765600 Weak transcription Brain Anterior Caudate brain
28 chr3:52747000-52766600 Weak transcription Brain Hippocampus Middle brain
29 chr3:52749000-52764800 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr3:52749000-52771600 Weak transcription Colonic Mucosa Colon
31 chr3:52749200-52764400 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr3:52749200-52766800 Weak transcription Right Ventricle heart
33 chr3:52749200-52767000 Weak transcription Fetal Heart heart
34 chr3:52749200-52767400 Weak transcription Placenta Amnion Placenta Amnion
35 chr3:52749200-52779800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
36 chr3:52749400-52764200 Weak transcription iPS-18 Cell Line embryonic stem cell
37 chr3:52749400-52764200 Weak transcription Duodenum Mucosa Duodenum
38 chr3:52749400-52764200 Weak transcription Rectal Mucosa Donor 31 rectum
39 chr3:52749400-52766600 Weak transcription Gastric stomach
40 chr3:52749400-52776200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr3:52750000-52765600 Weak transcription H1 Cell Line embryonic stem cell
42 chr3:52750000-52765600 Weak transcription H9 Cell Line embryonic stem cell
43 chr3:52750200-52765400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr3:52753200-52764200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr3:52753400-52764200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
46 chr3:52753400-52764200 Weak transcription HSMMtube muscle
47 chr3:52753400-52765400 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr3:52753400-52765600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr3:52753400-52765600 Weak transcription Brain Substantia Nigra brain
50 chr3:52753400-52765600 Weak transcription Ovary ovary

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Last update: Aug 31, 2015