Variant report

Variant	rs676764
Chromosome Location	chr7:127245513-127245514
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs1372042	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs325441	1.00[AMR][1000 genomes]
rs327513	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs391661	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7804005	1.00[AMR][1000 genomes]
rs806182	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831122	chr7:127143207-127357885	Active TSS Weak transcription Enhancers ZNF genes & repeats Strong transcription Flanking Active TSS Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:127232000-127245600	Weak transcription	Aorta	Aorta
2	chr7:127232200-127248200	Weak transcription	Spleen	Spleen
3	chr7:127241400-127248000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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