Variant report

Variant	rs67682141
Chromosome Location	chr13:92586360-92586361
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs4356343	1.00[EUR][1000 genomes]
rs55712417	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs67176352	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72633736	1.00[EUR][1000 genomes]
rs72633742	1.00[EUR][1000 genomes]
rs7335006	1.00[EUR][1000 genomes]
rs7335305	1.00[EUR][1000 genomes]
rs73612907	1.00[EUR][1000 genomes]
rs7983944	1.00[EUR][1000 genomes]
rs7992535	1.00[EUR][1000 genomes]
rs8002200	1.00[EUR][1000 genomes]
rs9589391	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3378326	chr13:92445514-92816367	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv900883	chr13:92481236-92602622	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv900884	chr13:92548841-92595572	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS	n/a	n/a	inside rSNPs	n/a
4	nsv900885	chr13:92561714-92621620	Weak transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
5	nsv528318	chr13:92575622-92607374	Weak transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
6	nsv900886	chr13:92576149-92626399	Enhancers ZNF genes & repeats Weak transcription Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
7	esv10926	chr13:92577389-92586920	Weak transcription Enhancers ZNF genes & repeats	n/a	n/a	inside rSNPs	n/a
8	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:92585600-92587400	Enhancers	Fetal Lung	lung
2	chr13:92585800-92587000	Enhancers	Fetal Kidney	kidney
3	chr13:92586200-92586600	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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