Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1411518	1.00[CEU][hapmap];1.00[YRI][hapmap]
rs17668748	1.00[CEU][hapmap]
rs1887118	1.00[CEU][hapmap]
rs4356343	1.00[CEU][hapmap];0.91[YRI][hapmap];0.82[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55712417	1.00[EUR][1000 genomes]
rs6492566	1.00[CEU][hapmap]
rs67176352	1.00[EUR][1000 genomes]
rs67682141	1.00[EUR][1000 genomes]
rs72633736	1.00[EUR][1000 genomes]
rs72633742	0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7335006	1.00[CEU][hapmap];0.91[YRI][hapmap];1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7335305	1.00[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73612907	1.00[EUR][1000 genomes]
rs7983944	1.00[CEU][hapmap];0.82[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7986027	1.00[CEU][hapmap]
rs8002200	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9560875	1.00[CEU][hapmap]
rs9589358	1.00[CEU][hapmap]
rs9589390	1.00[YRI][hapmap];0.98[AFR][1000 genomes]
rs9589391	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9589396	1.00[CEU][hapmap];0.91[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3378326	chr13:92445514-92816367	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv2756005	chr13:92584199-93080799	Enhancers Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv562722	chr13:92607374-92733984	Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:92645200-92646400	Weak transcription	Brain Hippocampus Middle	brain
2	chr13:92645400-92647000	Enhancers	Brain Substantia Nigra	brain
3	chr13:92645800-92648400	Enhancers	Brain Cingulate Gyrus	brain

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