Variant report
| Variant | rs6776465 |
|---|---|
| Chromosome Location | chr3:143296624-143296625 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr3:143256000-143305600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 2 | chr3:143270600-143304800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 3 | chr3:143277400-143301200 | Weak transcription | Esophagus | oesophagus |
| 4 | chr3:143277400-143303600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 5 | chr3:143277400-143310200 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 6 | chr3:143284000-143306400 | Weak transcription | Spleen | Spleen |
| 7 | chr3:143284400-143299200 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 8 | chr3:143285000-143300400 | Weak transcription | Brain Anterior Caudate | brain |
| 9 | chr3:143286800-143298000 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 10 | chr3:143286800-143300400 | Weak transcription | GM12878-XiMat | blood |
| 11 | chr3:143286800-143302000 | Weak transcription | Brain Angular Gyrus | brain |
| 12 | chr3:143286800-143304400 | Weak transcription | Primary B cells from peripheral blood | blood |
| 13 | chr3:143286800-143304800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 14 | chr3:143287000-143297600 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 15 | chr3:143287000-143305000 | Weak transcription | Colon Smooth Muscle | Colon |
| 16 | chr3:143287200-143297400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 17 | chr3:143287400-143304800 | Weak transcription | Fetal Intestine Small | intestine |
| 18 | chr3:143289400-143303000 | Weak transcription | Fetal Stomach | stomach |
| 19 | chr3:143289600-143304600 | Weak transcription | Primary hematopoietic stem cells | blood |
| 20 | chr3:143290600-143302400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 21 | chr3:143290600-143304600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 22 | chr3:143291000-143301400 | Weak transcription | Lung | lung |
| 23 | chr3:143291000-143303600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 24 | chr3:143291000-143304600 | Weak transcription | Adipose Nuclei | Adipose |
| 25 | chr3:143291200-143305000 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 26 | chr3:143291600-143301400 | Weak transcription | Placenta | Placenta |
| 27 | chr3:143291600-143305000 | Weak transcription | Duodenum Mucosa | Duodenum |
| 28 | chr3:143292400-143305400 | Weak transcription | Fetal Muscle Leg | muscle |
| 29 | chr3:143292600-143297200 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 30 | chr3:143293000-143304800 | Weak transcription | Aorta | Aorta |
| 31 | chr3:143293600-143301000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 32 | chr3:143294200-143304800 | Weak transcription | Brain Hippocampus Middle | brain |
| 33 | chr3:143294400-143317800 | Weak transcription | Brain Substantia Nigra | brain |
| 34 | chr3:143294800-143298800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 35 | chr3:143294800-143309400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 36 | chr3:143295000-143296800 | Strong transcription | Ovary | ovary |
| 37 | chr3:143295000-143297000 | Enhancers | HUVEC | blood vessel |
| 38 | chr3:143295000-143297800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 39 | chr3:143295200-143297600 | Strong transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 40 | chr3:143295200-143300400 | Strong transcription | Primary T cells from cord blood | blood |
| 41 | chr3:143295400-143297400 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 42 | chr3:143295600-143297600 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 43 | chr3:143295600-143301200 | Weak transcription | Primary monocytes fromperipheralblood | blood |
| 44 | chr3:143295800-143302600 | Weak transcription | Fetal Lung | lung |
| 45 | chr3:143296200-143297600 | Strong transcription | Primary B cells from cord blood | blood |
| 46 | chr3:143296200-143313200 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 47 | chr3:143296400-143297600 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 48 | chr3:143296400-143297800 | Strong transcription | Fetal Muscle Trunk | muscle |
| 49 | chr3:143296600-143299400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
